Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1649 |
Symbol | |
ID | 5737741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 1550239 |
End bp | 1551132 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 641284150 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_001549693 |
Protein GI | 159906031 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGTC AAAAAAAGAT TTTAAAAATA ACTGCTGATT CAAAAATTGC TGGAAACAAG TTAATCGATG TTTTAAAGGA CAATTTTGAA CTTTCCAATA AAATGATAAA AAAATTTGAT AAAGAAAAGA AAATTTTTGT AAATTCTAAA ATTATTTCCT TAAAATCAAA ATTAAAAGAA AATGAAACTG TTTCTGTTGA AATCGATTGC GGAATTAATA ATATTGATCC AGAAGAACTG CCATTAAACG TAATTTACGA AGATGACGAT TTATTGATTG TTGATAAACC AAAAAATATG GTTGTTCACC CAACTAAAAA TGTATTATCA AAAACACTTG CAAATGCAAT TTCAAATCAC CAGAAAATAA ATAATCAAAA CTACAAAATA AGATTTGTAA GCCGGCTTGA TATGGACACT ACTGGACTTT TAATCATTGC AAAAAATTCA TATTCCCATC AACACTTGGC AAAACAGATG GATGAAGGAA TTTTGGAAAA AATATATGTC GCAGTGGTAA ATGGACGTTT GGATTTAAAA GAAGGGATTA TTGAAGATTC AATCGATTTA AATGACGACG GTATAAAAAG AGAATTATCC AATTCTGGAA AAATTTCAAA AACTAAATAC AAAGTAATCG AAGAATTAAA AAATGCATCA GTTCTTGAAA TAAACTTACT TACTGGCAGA ACGCACCAGA TAAGGGTTCA TTTATCAAGT CTTGGAAATT ATATACTTGG GGACATCCTT TATGGAAAAA CTTCTAAGTT AATTGATAGA CAAGCTCTTC ATTCGCATAT TTTAAGATTT ATTCATCCAA TTACAAAAGA AAGAAAGGAA TTTACTTCAA AACTGCCAGA TGATATGGAA AATCTCATAA AAAATTTGAA ATAG
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Protein sequence | MESQKKILKI TADSKIAGNK LIDVLKDNFE LSNKMIKKFD KEKKIFVNSK IISLKSKLKE NETVSVEIDC GINNIDPEEL PLNVIYEDDD LLIVDKPKNM VVHPTKNVLS KTLANAISNH QKINNQNYKI RFVSRLDMDT TGLLIIAKNS YSHQHLAKQM DEGILEKIYV AVVNGRLDLK EGIIEDSIDL NDDGIKRELS NSGKISKTKY KVIEELKNAS VLEINLLTGR THQIRVHLSS LGNYILGDIL YGKTSKLIDR QALHSHILRF IHPITKERKE FTSKLPDDME NLIKNLK
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