| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1637 |
|---|
| Symbol | |
|---|
| ID | 5737522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 1533217 |
|---|
| End bp | 1534374 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641284138 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001549681 |
|---|
| Protein GI | 159906019 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1033] Predicted exporters of the RND superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCG AAAAAATCTT ACAGAAAATA GCTGAGGCAT CAGAAAGACG CCCTTTTACG
GTTGTTGCAG TTGTTATTAT CCTCACGATA TTCATGGCTT TCATGGCTAC AGGTGTTGAG
TCTCAAACAG ATTACGAAAA GATGGTTCCG CAAGATGATC CTGTAATCGT AGCTTTAAAC
GAAATAAGGG ATGAATTTGG CGGTACTGAG ACAGTAATGC TCGGGATAAA ACTCGTGGCA
TCCGATAGCT CTGAAAAAGT AACTGATATC CGTGATCCGC GAGTTTTAGA ACTTGTGGAC
TTTTTAGAAC AGGATATTGG AAGCATGGAT TTGGTAACGT CTGTTAGTTC AAAAGTGGAC
GTTTTAAGGG CATATAATAA CGATGTTATT CCAAATGACA TTTCAAGAGT AAAGGCGATA
TATCAAAATT TGCCTGAAAG TTCGAGCGAG GGCATATTCA ACGACGATTA TTCAATGGTC
GTAGTTTATG CAATGACTGA TGCTGGAACC GAGGATAAAA AGAAACTCGT TAAAGATATA
AATGCAAGAT TGGAAGAATC TCCAATTCCC CCCGGAGTTG AAGTGGTTAC AACAGGTACG
CCTGCATTAA GTGAACTTAT CCGAAGGATG ATGGACGAAA GTCAGGCAGT AACTGGTCTT
GCTTCACTTT TAGCGATATT TACAATATTA TTATTGTACT TTAGAAATTT TATAAAATCA
ATACTGCCGT TAATACCCGT TATAGTTGCA GTTGTATGGG CTGCAGGTGC AATGGCAATA
TTCGGTATTC CAATGGATAC CGCAACATCG GTTATGGGTT CACTGCTTCT AGGGCTTGGT
ATCGATTATG GAGTTCACCT GTATCACAGG TATGAAGAAG AACTCCGGGA AGGAAAAACA
CTGGAAGAAG CGATAAATAT TGCAGTAGTA AGTACTGGAA GTGCAGTTTT GGTGACTACC
GTAACTACAA TGGCAGGTTT TGCTGCATTA ACGATTGCGC CATTATCAAT GATGGCAAAC
ATGGGTAAAG TCTGTACATT AGGTATATTC TTCTGTATGG CTGCAGTTAT CTGTTTATTA
CCTCCATTAA TTGTAATTGA AGAAAGATAC ACAAGACCAT TCCTCAATAA ACTTACCTTA
AAATTAAAAG GTGAATAA
|
|---|
| Protein sequence | MKAEKILQKI AEASERRPFT VVAVVIILTI FMAFMATGVE SQTDYEKMVP QDDPVIVALN
EIRDEFGGTE TVMLGIKLVA SDSSEKVTDI RDPRVLELVD FLEQDIGSMD LVTSVSSKVD
VLRAYNNDVI PNDISRVKAI YQNLPESSSE GIFNDDYSMV VVYAMTDAGT EDKKKLVKDI
NARLEESPIP PGVEVVTTGT PALSELIRRM MDESQAVTGL ASLLAIFTIL LLYFRNFIKS
ILPLIPVIVA VVWAAGAMAI FGIPMDTATS VMGSLLLGLG IDYGVHLYHR YEEELREGKT
LEEAINIAVV STGSAVLVTT VTTMAGFAAL TIAPLSMMAN MGKVCTLGIF FCMAAVICLL
PPLIVIEERY TRPFLNKLTL KLKGE
|
|---|
| |