| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1627 |
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| Symbol | |
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| ID | 5737688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 1521077 |
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| End bp | 1523005 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641284128 |
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| Product | replication factor A |
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| Protein accession | YP_001549671 |
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| Protein GI | 159906009 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTG ACAAGTTAAA GCAAAAAATA TTATCAAAAA TTAACCAAGA AGAACTCGAA
AAAAAAGTAA ACGAAAAAAT TGAAGAAAAT TCTGGACTTC TAGGTGAAGA AAGTGCAGTA
ATGCTGGTTG CGCAGGAACT TGGGATAGAA ATAACATATG GGGATGATGA AGAGGAATAT
GATTTTACAA TCAATGATAT TGCTGACGGG CAGAAAAATG TTGAAGTTAC TGGAAAAATC
ATTGAAATTT CGCCTGCCAA GGAATTTAAC CGAAAAGATG GGTCAACTGG AAAACTTGCA
TCAATTACTA TTGGGGATAA TACTGGAATT ACAAGACTTA CGCTCTGGAA CGACAAAACA
GATCTTATCG AAGGACTTAA AAAAGGAGAC GTTGTAAAAA TTGAAAATGC ATTTAGCAGA
AAATGGAATG ACAAAGTTGA ATTAAATAGT GGTTCAGAAC TTTCAATTGA CAAACTTAAA
AAGTACGATG AATCCCGATA TCCTATTTTA AAAGAGAATT ATAAAATTTC AGAATTAATG
CCTAATTTAT CAGGGACAAT TAATGCAGAA GTTGTTGCAG CATACCCTAA AAAAGAATTT
AACCGAAAAG ATGGAACAAA CGGCCAGCTA AAATCATTGA TATTAAAAGA TGACACTGGA
AGTATACGGG GAACCCTCTG GAACGAACTT GCAGATTTTG AAGTTAAAAA AGGAGATATT
GCAGAAGTAA GTGGGTATGT GAAACAAGGT TATTCTGGAC TTGAAATTTC TGTAGATAAT
ATTGGAATTG TTGAAGAGTC TGTCAAAGAA GAAAAATCTG TTGAAAAAAT GAACATTTCT
GAACTTGCAA GTTTTGATGG AGAATATGTG ACAATCTCTG GAAATGTTGC TAATATTTCG
GGTTCAAGAG AAGTTCAGTT TAGTGATAGA ACTGCAGAAG TTCAAGATAT TTATTTAAAT
GACGGAACCG GAATGGTAAA AATTGCATTT TGGGGTGCAA ACAGAAATAT TCTCAACGAT
TTAAAGGAAG GGGATTATTT AAACGTTTCA AACTGTAAAT TAAGAACTTA CACTGATAAT
ACTGGCGAGA AAAGGGCTGA TTTAACTTAT AATTATATGT CGGAACTTAA AAAAGATGAA
ACTGCAAGCG AAAAAATAGT TGAAAAAATA ACGGCTATTG GAGATATCTT AAGCGGTAGT
GCAGATAGCT CTGATTTGAC GGTTATTGGA ATGGTTACAA ATGCATATCC GGTAAACGAG
TTTTCGAGAA GTAACGGTGG AACTGGAAAA GTTAGAAACA TCCAGTTAGA TGACAGCACT
GGAAGCATAA GGATGGCTCT ATGGGATAGT GACGCAGAAA TTGAAATTTC AGAAGGTGAC
GTTGTAAAAT TAATACATGG ATTTGCTAAA GAAAGTGGCG AGTACATGGA TCTGTCAACT
GGAAGGTTTG GTAGAATCGA AGTAAACCCT GAAGGAATTT CAATAAAATC TCCAAGAAAT
TACATTGCAG ATCTTGAAGA AGGTGTTTCA ACTGAAATCA GTGGAACTGT TGTAGATTAC
AGAAAACAGG ATGTAATTCT TAGTTTATGT CCAAACTGTA GAAAAAGAGT TAGTTTAGTT
GATAATAAAT ACACGTGTGA AGTTTGTGGG GAAGTTACTC CAAACGAACT TTTAGTTTCA
AATTTAACGA TTGACGATGG AACTGGTGTT ATCAACTGCA GAATATATGG AAACAACGTT
GAAAAAGTAA CAGAACTTTC AAAAAATAAA ATAAAAGAAA TGAATTTAGA TGCTCTTTCA
AATGTGCTTG GAAAAGATGT TTTATTCTAT GGAACACCTT CATTTAGAAA TGATGACTTG
GAATTTGCAG TAAAAAGAGT TAATTTCGTA GACGCATCAA AAGAATTGGA AGTTTTAAAA
CAACTCTAA
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| Protein sequence | MNIDKLKQKI LSKINQEELE KKVNEKIEEN SGLLGEESAV MLVAQELGIE ITYGDDEEEY
DFTINDIADG QKNVEVTGKI IEISPAKEFN RKDGSTGKLA SITIGDNTGI TRLTLWNDKT
DLIEGLKKGD VVKIENAFSR KWNDKVELNS GSELSIDKLK KYDESRYPIL KENYKISELM
PNLSGTINAE VVAAYPKKEF NRKDGTNGQL KSLILKDDTG SIRGTLWNEL ADFEVKKGDI
AEVSGYVKQG YSGLEISVDN IGIVEESVKE EKSVEKMNIS ELASFDGEYV TISGNVANIS
GSREVQFSDR TAEVQDIYLN DGTGMVKIAF WGANRNILND LKEGDYLNVS NCKLRTYTDN
TGEKRADLTY NYMSELKKDE TASEKIVEKI TAIGDILSGS ADSSDLTVIG MVTNAYPVNE
FSRSNGGTGK VRNIQLDDST GSIRMALWDS DAEIEISEGD VVKLIHGFAK ESGEYMDLST
GRFGRIEVNP EGISIKSPRN YIADLEEGVS TEISGTVVDY RKQDVILSLC PNCRKRVSLV
DNKYTCEVCG EVTPNELLVS NLTIDDGTGV INCRIYGNNV EKVTELSKNK IKEMNLDALS
NVLGKDVLFY GTPSFRNDDL EFAVKRVNFV DASKELEVLK QL
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