| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1598 |
|---|
| Symbol | |
|---|
| ID | 5737359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 1493939 |
|---|
| End bp | 1494556 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 641284098 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001549642 |
|---|
| Protein GI | 159905980 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1739] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000000468439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTATTTT TGGAAAATAA TTTTTATAGA ACCATTAAAT CATTTTCAAA AGTTGAACTG
GTTTTCAAAG GTTCCCTCTT TATTGGTTAC GGAAAACCTG TAAAAAGCGA AATCGAAGCA
AAAGAATTTA TAAATGAAAT CAAGTCCATT CACAGTGATG CAAATCATAA TGTTTCTGCA
TATCGAGTAG ATATTGAAAA TAACTTTGCA ATGAAGTACG ATGACGATGA CGAACCTTCG
GGAAGTGCAG GAAAACCAAT TTACAAAGTT ATGGAACTAA AAAATCTTCA AAATACGGTC
ATTGTTGTTA CAAGATATTT TGGAGGAGTT AAATTAGGAT ACGGCGGACT TGTAAAAGCA
TACAGTGATA CTGCAACCGA AGTTGTAAAT TCGTGTGGAA TTTTAGAAGT TTTTGAAAAG
ACATATTTGT TTTTGGAGTT TGATTACTCT GAAATACAAA AAATTAAGCC GGTTGTTGAA
AATTTCGGAA AAATTGTTGA TGAAAACTAT TCTGATGTTG TAAAATTTAA AGTAGAAGTT
AAAAAAGGAC ATGATGATGA ATTAATTAAA AAGCTGGTCA ATTTAACAAA AAATAAAATA
AAAATCGGTA ATTTATAA
|
|---|
| Protein sequence | MVFLENNFYR TIKSFSKVEL VFKGSLFIGY GKPVKSEIEA KEFINEIKSI HSDANHNVSA
YRVDIENNFA MKYDDDDEPS GSAGKPIYKV MELKNLQNTV IVVTRYFGGV KLGYGGLVKA
YSDTATEVVN SCGILEVFEK TYLFLEFDYS EIQKIKPVVE NFGKIVDENY SDVVKFKVEV
KKGHDDELIK KLVNLTKNKI KIGNL
|
|---|
| |