| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1581 |
|---|
| Symbol | |
|---|
| ID | 5737430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 1478047 |
|---|
| End bp | 1478994 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 24% |
|---|
| IMG OID | 641284081 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001549625 |
|---|
| Protein GI | 159905963 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.126829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATCGG ATCTGATTTT AGATATTGAA AATGAAAATA ATAATGAAGA AATTTTAGAT
TTTTTAAATA TACTGGGTAG TATATATAAA AACAAAGAAC CCGTATTTGA TAATTCAACC
CTTGAAAAAT TAGGGATTGA AAAAATTGAA AACGATTTTG CGATTTATGG TAAAAATTAT
CCATTATTTA AAATGCTTTA CTATTTTAAC GAAATTCCGT TATTTAATTC TGAAAAAGAA
TCTATTTTAT TTTTAAAAAA TAACAATTTA AATCCATCAA AAACTTATTC TGAACTTGGT
AGTTTTGAAA AAGAAAAATT AAAAGAATTA ATTTTAAATT CTGCTGAAAA TAAAGTTCAC
GATATTTATA AACCCTTTGT AAAGGAGGTA CTTTTTGGAA ATACATATTA TTTTTCGAAA
TATAATATGG AATTAAAAGA ATACGTTTCA AACTTAAATG CAGTATATAA ATTAAAAGAA
TATAATATTG TTAAAAATTG CATTTTGAAA AAAGAAAGGC CTCCAAAAAA TCTAATCTTA
AAATATAAAA TGGACCTCTC AAAATCGATT GATTTGTTCA ATAAAAAATT GAATAGCGCA
GAGATCAGAG CATTTTCAAT GGATTTCAAT GGAAAAAACT TTGATTGTCA GTACATCTAT
TTTAAACAAT CTCTTTGGGA TAAACTTAAG GGTTGGTTTT TCGGAGAAAT TAATGGAATT
CACTATCCTG CACTTGTAAA TATCGCATAT AATAACCAAA AAATTGATTA TTTAAAACCA
CTTTTTATTT TAAATGACAG TGAAGACGAA ATAAATGTTG TTGCAAGGGT TCCAAAACTT
TTATATTTAA AATATGGCCT AACATTAAAC CACATTAAAT TAAATGGAAA TCATACATAC
TTTGGAAAAT GGAACATTAG AAATTTTAAA AAAATTTTGG ATGTGTAA
|
|---|
| Protein sequence | MLSDLILDIE NENNNEEILD FLNILGSIYK NKEPVFDNST LEKLGIEKIE NDFAIYGKNY
PLFKMLYYFN EIPLFNSEKE SILFLKNNNL NPSKTYSELG SFEKEKLKEL ILNSAENKVH
DIYKPFVKEV LFGNTYYFSK YNMELKEYVS NLNAVYKLKE YNIVKNCILK KERPPKNLIL
KYKMDLSKSI DLFNKKLNSA EIRAFSMDFN GKNFDCQYIY FKQSLWDKLK GWFFGEINGI
HYPALVNIAY NNQKIDYLKP LFILNDSEDE INVVARVPKL LYLKYGLTLN HIKLNGNHTY
FGKWNIRNFK KILDV
|
|---|
| |