| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1575 |
|---|
| Symbol | |
|---|
| ID | 5737444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 1471954 |
|---|
| End bp | 1472868 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641284075 |
|---|
| Product | auxin efflux carrier |
|---|
| Protein accession | YP_001549619 |
|---|
| Protein GI | 159905957 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | [TIGR00946] he Auxin Efflux Carrier (AEC) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTTA TGGAAATCAT GTATGTAATT GTATTTTTGA TTTTAATCGG GTATATTTCA
AGACATCTTA AAATACTCGA CGAAAAAGAC AGGATGGTCT TAAATAAAAT AGTAATACAC
ATTGCAATGC CAGCAACAAT ATTTTTGCAA TTGCTTACAA ATGTAACTCC TTCAGACCTT
CCAGAATTTA TGAAACTACC AGTAATAATA TTTATATCCA CAGCAACATG TGCAGTTTTA
GCATATCTTG TTGGAAAGCG TTTAAAATTA GATAATAAAT CTCTTGGTGG ATTTGTACTT
GTTGCATCAA TTGGAAATAC TGGATTTTTA GGTTACCCTG TAATTCTCGG GTTTTATGGA
AATGAAGGTC TTTTAAGGGC AATTTTTTGT GATATGTCCG CAATTTTTTG TAGCATGCTT
CTTGGAACCT ATATTGGAGT TAAACTAAGC GGTGCAAAAA AAAGCATTTT AAAAGAAGTA
TTTACGTTTC CCCCCTTATT TACGGGGATA CTTACATTAA TATTGATATT ATTACACGTA
AACTTATCGA TATTCCCGGA ATTTTTTATA AAATCACTTG AATACATGTC AAGTGCAACA
ATTCCCTTAA TAATGCTTTC GCTTGGACTT TCTCTATCTC CAAAAGCTGC AAAATTTGGA
ATATTCTATG GGATTTTGGC ATCCATATTT AGAATGGTAA TTTCCCCATT AGTTGCATTT
CCAATTTCCG AAAGTCTTTT ATCAAACCAG TTAGATAAAC AAGTAGCGAT AATGCAATCA
GCAATGCCTT CCGCAATGAT GCCGCTAGTT TATGCAGTAA TCTACGATTT GGACGTAAGA
CTTGTCGCAT CAGCATGTTT TGTTTCAACT GTCGTTTCAT TGCTCGTGTT GCCGATAATA
TACACTGTAT TCTAA
|
|---|
| Protein sequence | MMFMEIMYVI VFLILIGYIS RHLKILDEKD RMVLNKIVIH IAMPATIFLQ LLTNVTPSDL
PEFMKLPVII FISTATCAVL AYLVGKRLKL DNKSLGGFVL VASIGNTGFL GYPVILGFYG
NEGLLRAIFC DMSAIFCSML LGTYIGVKLS GAKKSILKEV FTFPPLFTGI LTLILILLHV
NLSIFPEFFI KSLEYMSSAT IPLIMLSLGL SLSPKAAKFG IFYGILASIF RMVISPLVAF
PISESLLSNQ LDKQVAIMQS AMPSAMMPLV YAVIYDLDVR LVASACFVST VVSLLVLPII
YTVF
|
|---|
| |