Gene MmarC6_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1562 
Symbol 
ID5737366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand- 
Start bp1459937 
End bp1461025 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content35% 
IMG OID641284062 
Productsuccinyl-CoA synthetase, beta subunit 
Protein accessionYP_001549606 
Protein GI159905944 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAC ACGAATATGA AGCAAAGGAA ATTTTTAAAG AAAATGGAAT CCCAATTCCA 
AAAAATAAAC TTACTTGCGG TAAAGTTGAT AGTATCGATT ATCCTGTTGT CATAAAAGCG 
CAAGTTTTGG TCGGTGGAAG GGGAAAAGCT GGCGGAATCT TATTTGCAGA TAATTTAGAT 
GATGCAAACG AAAAAATTGA ATCATTAATT GGAAAAACGG TAAAGGGAGA ACTCGTTGAA 
AAAGTACTCC TTGAAGAGCA GATTAAAATC GCGAAAGAAT ACTATGTTGG CGTTGTTGTT 
AGCAGAAACG AAAAAAACAA TGTTGTCATA TTTTCAACCG AAGGTGGAGT GGATATTGAA 
GAAGTAGCCT CAAAAACTCC TAAAAAAATA ATAAAATTAC AATTAGAACC TGGAAAAGAA 
TTTTTACCCT ACCTTGCAAG AGAAATGCTC AAAAAAGCAG GCATTCCAAG TGCAGAAATT 
CCAAAAGTAG CAGATGTTTT ATGCAAAGTT TACAAAGCAT TCAAAGACAT GGATGGAATT 
TTAGCAGAAA TAAACCCGTT AGTGTTTACC GAAGATGGAA AAATCATTGC TGCTGATGCG 
GTTTTAAATA TTGACGACGA TGCATATTTC AGACATAAAT ACGATAAATT TGAAGAATTT 
AACAAACAGG AAAAATCCGA ATTTGCATAC GTTGAACTTG ATGGAGACAT TGCAGTTATT 
GGAAATGGTG CAGGGCTAAC TCTTGCAAGC ATGGATATTG TAAAAGAGTT CGGTGGAAAT 
CCTGCATGTT TCTTAGATGT TGGTGGCGGT TCAAATAGGG AAACCGTAAA AAAAGCACTT 
TTAAAAGCAA CTTCTAGAAA AAATGTTAAA GGAGCATTTA TCAACATTCT TGGTGGAATC 
ACAAGATGTG ATGAAGTTTC ACTTGGAATT GTAGACGTTT TAAAAGAAAA TCCAAACCTC 
AAGTTTGCCG TTAGAATGAT GGGAACTAAC GAAGAAGAAG GAAGAAAAAT CCTTTCTGAA 
AATGGAGTAA ACTTCGAAAA TTCAATGGAA GGGGCTGCGA AAGCACTTAT GGAATTAATA 
AACAGTTAA
 
Protein sequence
MKLHEYEAKE IFKENGIPIP KNKLTCGKVD SIDYPVVIKA QVLVGGRGKA GGILFADNLD 
DANEKIESLI GKTVKGELVE KVLLEEQIKI AKEYYVGVVV SRNEKNNVVI FSTEGGVDIE 
EVASKTPKKI IKLQLEPGKE FLPYLAREML KKAGIPSAEI PKVADVLCKV YKAFKDMDGI 
LAEINPLVFT EDGKIIAADA VLNIDDDAYF RHKYDKFEEF NKQEKSEFAY VELDGDIAVI 
GNGAGLTLAS MDIVKEFGGN PACFLDVGGG SNRETVKKAL LKATSRKNVK GAFINILGGI 
TRCDEVSLGI VDVLKENPNL KFAVRMMGTN EEEGRKILSE NGVNFENSME GAAKALMELI 
NS