Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1558 |
Symbol | |
ID | 5737313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 1457254 |
End bp | 1458363 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641284058 |
Product | hypothetical protein |
Protein accession | YP_001549602 |
Protein GI | 159905940 |
COG category | [S] Function unknown |
COG ID | [COG2237] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.796051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATCAA TAAAGGATAT CGGAAAAGAT TATAACGTTC CCGAAGATAA AAAGTATCTC GTTATTGTTG TCGACATGGA TGACGATGTT GGAAGAAAAG CAAATATTAG GACTCCAATT TTAAGTAGGG AGGATAATAT CAATGCAGCT GTAAAGCTCG GATTGACTGA TCCTGGGGAT AGTGATGTAA ACTCCATACT CGGTGGAATT CAACACTACG ACCATCTGAA AAAAGAAGGA AAAGACGTCG AAATTGCAAC AATTTCTGGA GATATCGATA TCGAATCAGA AGTTTGTGCA ATTAAAATTA AGGAACAGAT AGACTTTTTA ATTTATCTTT ACGAACCTAA TTTCATATAT CTCGTTTCAG ATGGGAAAGA AGATGAAATG GTTTTAAAAT ACCTTGAATT AAAAGATATT TTTGTCTGGA AAAAGAGAAT CGTAATTAAG CAGAACGAAT CTCTCGAATC AACGTACTAC CTCGTACAAG AATTTATAAA AAAGACAATG TCTCAGTACA TTCCTTTAAT ATTTACATCA ATCGGATTTG CAATGATTCT TTATGCGATA TTCTCGGATC TTGGCTGGAG AATAATTGCA GGACTTATTG GTATTTATAT TTTATCTGAA GGTGTTGGAT TAGTTGAATC TATCAAAAAG ACACTCAGTG AAAGTAAAAA AGGGCTTGAA GTTGGAAAAT TATCTCCATT TGGAAATATT TTAGGATTTT TGATACTTAT TGTTGGGATA CTCTACTCTT ACAGGGTTTC GGTAGATCCC GAATTAACTA TATTCATCGG AAAATTCCTG TTAAATATTG CGAACCCTTT AACGTTAGGA TTTGTGTTAT TGGTACTCGT TCACTTCATA GATGATTTGA TACATACTGA AAAAAGTATA CTCAGGCTTT TAAAAAGGCT ATTCTTCAAC GTAATTTTGG CATTTATGCT TAGACAGATG TTGATTGTTT CTTCAGGTTA TTTAATAGGT TATACTGTTG AATTTACCGG CCTTGTAATG TATATCTTGG CATATGTTTC TGTATTGATA GTACTGTCTG TTGTATTATT TCATGAACCA AAAGACAAAG AAGGGCTTAT TACAGAATAG
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Protein sequence | MVSIKDIGKD YNVPEDKKYL VIVVDMDDDV GRKANIRTPI LSREDNINAA VKLGLTDPGD SDVNSILGGI QHYDHLKKEG KDVEIATISG DIDIESEVCA IKIKEQIDFL IYLYEPNFIY LVSDGKEDEM VLKYLELKDI FVWKKRIVIK QNESLESTYY LVQEFIKKTM SQYIPLIFTS IGFAMILYAI FSDLGWRIIA GLIGIYILSE GVGLVESIKK TLSESKKGLE VGKLSPFGNI LGFLILIVGI LYSYRVSVDP ELTIFIGKFL LNIANPLTLG FVLLVLVHFI DDLIHTEKSI LRLLKRLFFN VILAFMLRQM LIVSSGYLIG YTVEFTGLVM YILAYVSVLI VLSVVLFHEP KDKEGLITE
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