Gene MmarC6_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1558 
Symbol 
ID5737313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp1457254 
End bp1458363 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content33% 
IMG OID641284058 
Producthypothetical protein 
Protein accessionYP_001549602 
Protein GI159905940 
COG category[S] Function unknown 
COG ID[COG2237] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.796051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATCAA TAAAGGATAT CGGAAAAGAT TATAACGTTC CCGAAGATAA AAAGTATCTC 
GTTATTGTTG TCGACATGGA TGACGATGTT GGAAGAAAAG CAAATATTAG GACTCCAATT
TTAAGTAGGG AGGATAATAT CAATGCAGCT GTAAAGCTCG GATTGACTGA TCCTGGGGAT
AGTGATGTAA ACTCCATACT CGGTGGAATT CAACACTACG ACCATCTGAA AAAAGAAGGA
AAAGACGTCG AAATTGCAAC AATTTCTGGA GATATCGATA TCGAATCAGA AGTTTGTGCA
ATTAAAATTA AGGAACAGAT AGACTTTTTA ATTTATCTTT ACGAACCTAA TTTCATATAT
CTCGTTTCAG ATGGGAAAGA AGATGAAATG GTTTTAAAAT ACCTTGAATT AAAAGATATT
TTTGTCTGGA AAAAGAGAAT CGTAATTAAG CAGAACGAAT CTCTCGAATC AACGTACTAC
CTCGTACAAG AATTTATAAA AAAGACAATG TCTCAGTACA TTCCTTTAAT ATTTACATCA
ATCGGATTTG CAATGATTCT TTATGCGATA TTCTCGGATC TTGGCTGGAG AATAATTGCA
GGACTTATTG GTATTTATAT TTTATCTGAA GGTGTTGGAT TAGTTGAATC TATCAAAAAG
ACACTCAGTG AAAGTAAAAA AGGGCTTGAA GTTGGAAAAT TATCTCCATT TGGAAATATT
TTAGGATTTT TGATACTTAT TGTTGGGATA CTCTACTCTT ACAGGGTTTC GGTAGATCCC
GAATTAACTA TATTCATCGG AAAATTCCTG TTAAATATTG CGAACCCTTT AACGTTAGGA
TTTGTGTTAT TGGTACTCGT TCACTTCATA GATGATTTGA TACATACTGA AAAAAGTATA
CTCAGGCTTT TAAAAAGGCT ATTCTTCAAC GTAATTTTGG CATTTATGCT TAGACAGATG
TTGATTGTTT CTTCAGGTTA TTTAATAGGT TATACTGTTG AATTTACCGG CCTTGTAATG
TATATCTTGG CATATGTTTC TGTATTGATA GTACTGTCTG TTGTATTATT TCATGAACCA
AAAGACAAAG AAGGGCTTAT TACAGAATAG
 
Protein sequence
MVSIKDIGKD YNVPEDKKYL VIVVDMDDDV GRKANIRTPI LSREDNINAA VKLGLTDPGD 
SDVNSILGGI QHYDHLKKEG KDVEIATISG DIDIESEVCA IKIKEQIDFL IYLYEPNFIY
LVSDGKEDEM VLKYLELKDI FVWKKRIVIK QNESLESTYY LVQEFIKKTM SQYIPLIFTS
IGFAMILYAI FSDLGWRIIA GLIGIYILSE GVGLVESIKK TLSESKKGLE VGKLSPFGNI
LGFLILIVGI LYSYRVSVDP ELTIFIGKFL LNIANPLTLG FVLLVLVHFI DDLIHTEKSI
LRLLKRLFFN VILAFMLRQM LIVSSGYLIG YTVEFTGLVM YILAYVSVLI VLSVVLFHEP
KDKEGLITE