| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1540 |
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| Symbol | |
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| ID | 5738157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1438383 |
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| End bp | 1440524 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641284040 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001549584 |
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| Protein GI | 159905922 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTT TTCAAAAATT GCAAAAAGAA TTTAATTTAA AAACATTTCA GGTCGAAAAT
ACCGTTAAAT TAATTGATGA AGGAAATACA ATTCCATTTA TTTCAAGATA CAGAAAAGAA
GCAACAGGTT CACTTGATGA CGTTGTTTTG AGGAAATTTT TTGATAGATT GAATTACTTA
AGAAATTTAG AAGATAAAAA AGCCCAAACC ATAAAATTAA TCGATGAACA GGGTAAATTA
ACAGGAGAAT TAAAACAAAA AATTGAAAAA TCTGAACTTT TAACTGAACT TGAAGATATT
TACCGTCCAT TCAGGCCCAA AAGAAAAACA AGAGCAACCA TTGCAGAAAA TAAGGGTTTA
AAACCACTGT CTGAATTAAT TTTAAAACAG CATTTGGAAA AACCAATCGA AGAATTTGCA
AAAGAATTCA TTAATCTGGA ATTAGAAGTT AATTCAGTTG AAGATGCAAT TTCTGGTGCC
AAAGATATTA TTGCAGAAGA AATTTCGGAT AATGCAGACT ACAGAAAATT TATCCGTGAA
ACCACGTTTT CAGAAGGAAT TATTGCTGTA AAAGCAAAGA ATGTGGATGA AAAGTCAGTT
TATGAAATGT ATTATGAATA TTCTGAAGCG ATCAATAAAA TTCCCGGCCA CAGAATCCTT
GCAATAAATA GGGGCGAATC AGAAAAAGTT TTACAGGTAA AAATCGATGC ACCTGTTGAA
TTTATTCAAG ACGGGATATT TAAAAATATA ATTTTAGAAA ATTCGGAAAC TTCTGAAATT
TTAAAAGATA CAGTAATTGA CAGCTATAAA AGACTAATTG CACCATCAAT TGAAAGAGAA
ATTAGAAACA GCCTTACTGA AAAGGCTGAA AATGGTGCAA TCGAAGTATT TTCGAAAAAC
TTGAAGCAGT TGTTATTGCA ACCGCCAATA AAAAACAAAA CGGTACTTGG ATGGGACCCG
GCATTTAGAA CGGGCTGTAA AATTGCAGTA GTCGATGAAA CCGGAAAAGT TCTTGATAAA
ACGGTTGTGT ATCCTACAGA ACCGCATAAT AAAATTGCAG AAACTAAAAA ACAGGTTAAA
GAACTTATTA TAAAGCACGA TATCGACGTT ATCGCTATCG GAAATGGGAC TGCTTCGAGA
GAATCTGAAC ATGTTGTTTC TGAAATTTTA AAAGAAGTTG TAAAAGACGT CTACTACGTA
ATTGTAAATG AAGCAGGAGC TTCTGTTTAT TCTGCATCTG AACTTGGATC TGACGAATTT
CCAGAATACG ATGTTGGAAT TAGAAGTGCA ATATCTATTG CAAGAAGGCT TCAGGATCCC
TTAGCAGAAC TTGTAAAAAT CGACCCAAAA TCAATTGGTG TTGGCCAGTA CCAGCACGAT
ATGAACCAAA AAAAGTTATC TGAAAGTTTA GGTGCTGTTG TTGAATCTTC CGTAAACTCT
GTTGGAGTTG ATCTAAATAC TGCATCGGTT TCGCTTTTAA ATTACGTATC TGGAATTAAT
ATGGGAATTG CAAAAAATAT TGTAGCATAC CGAACTGAAA ATGGAAAATT CGAATCCCGA
AAAGAGCTTT TAAAAGTAAA CAAACTTGGT AAGAAAGCAT TTGAACAGTG TGCAGGGTTT
TTGAGAATTC CTGAAGGTAA AAATTTATTT GACAATACTG GCGTTCACCC CGAATCATAC
AAAATTGCAG AAAATTTACT CAATGAGCTA AATATCTCGA TAAAAGATAT TAAAGAGAAA
AAAATCGATA AAATTTCTGA AAAGGTCGAT ATTGAAAAAT TGGCTGAAAA ATTGGATTGC
GGAATCCCAA CACTTGAAGA TATAATAAAA GAACTTGAAA AACCTGGAAG AGACCCAAGA
GAAGACCTTC CAAAACCAGT TTTAAGAAGC GATGTTTTAG AACTTGAGGA TTTAAAAGAA
GGAATGATAT TAAAAGGAAC TGTAAGAAAT ATTGTTGACT TCGGAGCTTT TATTGATATT
GGAGTTCACC ACGATGGATT GGCACATATT TCTGAAATTG CTGACAGATT CATAAAACAT
CCCCTTGATG TAATCTCTGT TGGGGATATC GTAGATGTCA TGGTAATGGA CATTGATTTT
GATAAAAAGA GAGTTTCACT TTCAATAAAA CGTGCAAAAT AA
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| Protein sequence | MDIFQKLQKE FNLKTFQVEN TVKLIDEGNT IPFISRYRKE ATGSLDDVVL RKFFDRLNYL
RNLEDKKAQT IKLIDEQGKL TGELKQKIEK SELLTELEDI YRPFRPKRKT RATIAENKGL
KPLSELILKQ HLEKPIEEFA KEFINLELEV NSVEDAISGA KDIIAEEISD NADYRKFIRE
TTFSEGIIAV KAKNVDEKSV YEMYYEYSEA INKIPGHRIL AINRGESEKV LQVKIDAPVE
FIQDGIFKNI ILENSETSEI LKDTVIDSYK RLIAPSIERE IRNSLTEKAE NGAIEVFSKN
LKQLLLQPPI KNKTVLGWDP AFRTGCKIAV VDETGKVLDK TVVYPTEPHN KIAETKKQVK
ELIIKHDIDV IAIGNGTASR ESEHVVSEIL KEVVKDVYYV IVNEAGASVY SASELGSDEF
PEYDVGIRSA ISIARRLQDP LAELVKIDPK SIGVGQYQHD MNQKKLSESL GAVVESSVNS
VGVDLNTASV SLLNYVSGIN MGIAKNIVAY RTENGKFESR KELLKVNKLG KKAFEQCAGF
LRIPEGKNLF DNTGVHPESY KIAENLLNEL NISIKDIKEK KIDKISEKVD IEKLAEKLDC
GIPTLEDIIK ELEKPGRDPR EDLPKPVLRS DVLELEDLKE GMILKGTVRN IVDFGAFIDI
GVHHDGLAHI SEIADRFIKH PLDVISVGDI VDVMVMDIDF DKKRVSLSIK RAK
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