| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1535 |
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| Symbol | |
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| ID | 5737301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1434661 |
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| End bp | 1435191 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641284035 |
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| Product | tRNA-splicing endonuclease subunit alpha |
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| Protein accession | YP_001549579 |
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| Protein GI | 159905917 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAC CTAAAAAGAC AATACCTGCA AAACTTTCAG ACGAGAGAAT TGTAATTTAC
GATAAAGACG GAATATCCCG TTTAAATGAA AAAAGATACG GAGAACTTCA CGAAAATTTT
CTTTCACTTT CATTTGTAGA AGGACTCTAC CTTGTATCAA AAAACTGGAT ATCGTTGAGA
GATAAAAATA ATAAACTGCT TTCTTTTGGA GAATTGTTCG ATGTTGCACA GAATATTGAT
AGAAAATTGT GCATTCGATA TTTAGCATAT AAAGACCTCA GAAACAGGGG ATATACTGTT
CGAACGGGTT TAAAATACGG TTCTGATTTT AGACTTTACG AAAGAAGTAA TATTGATGAA
ATTCACTCGA GATACCTTGT AAAAGTTTTT TCAGAAGAAA TTCCTTGTGA AATTTCAGAA
ATTACAGGAT TTGTTAGGGT TGCACACTCA GTTAGGAAAG AATTAATTAT TGCAATAGTT
GATGCTGATG GAAGCGTCGT TTACTACAAC ATGGGATATT TAAAGCTTTA A
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| Protein sequence | MAKPKKTIPA KLSDERIVIY DKDGISRLNE KRYGELHENF LSLSFVEGLY LVSKNWISLR
DKNNKLLSFG ELFDVAQNID RKLCIRYLAY KDLRNRGYTV RTGLKYGSDF RLYERSNIDE
IHSRYLVKVF SEEIPCEISE ITGFVRVAHS VRKELIIAIV DADGSVVYYN MGYLKL
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