Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1493 |
Symbol | |
ID | 5737996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 1398550 |
End bp | 1399710 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641283994 |
Product | periplasmic binding protein |
Protein accession | YP_001549538 |
Protein GI | 159905876 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.277986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCACATT TTTTCAAAGA TATTAATTCA GGTGGTATAT TGAGTAAAAA AATAATATCC GTTATCTTGG CACTTATGAT GTCGCTTGTT GTCGCATTTT CAGGCTGTAT GGAAAGTAGC GAATCAACTG CATCTGAAGT TGCCAACACC ATTGAAATTG TAGACATGCT TGGAAGAACT GTTGAAGTTC CTGCCGATAT TCAAAAAATT GTATGTTCTG GACCAGGCTG TTTAAGATTG ATTTGTTACC TCAATACAAC TGAGTATTTG GTTGGAATTG AAGGATTTGA AAATACAAAT CTTATTGGAA GACCATACAG GCTTGCACAT GATGAATTCT CAGAACTTGA AGTAATTGGA AACGGAGGCC CACAAGACAT TAACGTTGGA CCAGACCCTG AAAAAGTACT AAATGTAATG CCGGATGTTA TATTCATAAC ATACATGGAA GCAGACAAAG CTGATGAACT TCAGGAAAAA ACAGGAATTC CTGTTGTAGT ATTAAGTTAC GGTGCACTTG GAAACTTCAA AAATGATGCA ATATTTGACT CATTAACCCT TTCTGGAAAA CTCCTCGGAA AAGAAGAAAG AGCTGAAGCA GTAATTTCAT ATATAACCGA AATTCAGGAC GAGTTAGATG AAAAAACTTC TGAAATTCCA GATGAAGAAA GACCTACTGT GTACGTTGGA GCAATTGGTA ACAAGGGTAT TCACGGAATC GACAGTACTG AAGGTTCATA TCCCCCATTT GAAGCATTGA ATATTGAAAA TATTGCAAAA GTTGCATCTA CTAAACACAT TTTCATAAGC AAAGAACAAT TAATTGAATG GAATCCAGAA TTCATCTTTA TCGATGAAGG TGGAATTTCA ATCGTATATG AAGACTACGC TAAAAACCAG GAATATTACG AATCCCTTGA TGCATTTAAA AATGGAAATG TTTACGGAAT ATTACCATTT AACTATTATA CAACAAACCT TGATACTGCA ATGGCAGATT CATACTACAT TGGATCTATC CTTTATCCTG AAGCATTTTC AGATATCGAT CCAGAAGCAA AAGCTGATGA AATATACGAA TTTTTAGTTG GAGAAGGAGT ATACTCTGAA ATGACTGAAA TGTTCGAAGG ATTTGGAAAA CTAGACTTTT CAAACCAATA A
|
Protein sequence | MPHFFKDINS GGILSKKIIS VILALMMSLV VAFSGCMESS ESTASEVANT IEIVDMLGRT VEVPADIQKI VCSGPGCLRL ICYLNTTEYL VGIEGFENTN LIGRPYRLAH DEFSELEVIG NGGPQDINVG PDPEKVLNVM PDVIFITYME ADKADELQEK TGIPVVVLSY GALGNFKNDA IFDSLTLSGK LLGKEERAEA VISYITEIQD ELDEKTSEIP DEERPTVYVG AIGNKGIHGI DSTEGSYPPF EALNIENIAK VASTKHIFIS KEQLIEWNPE FIFIDEGGIS IVYEDYAKNQ EYYESLDAFK NGNVYGILPF NYYTTNLDTA MADSYYIGSI LYPEAFSDID PEAKADEIYE FLVGEGVYSE MTEMFEGFGK LDFSNQ
|
| |