Gene MmarC6_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1479 
Symbol 
ID5737672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp1379998 
End bp1382151 
Gene Length2154 bp 
Protein Length717 aa 
Translation table11 
GC content41% 
IMG OID641283980 
Producttriple helix repeat-containing collagen 
Protein accessionYP_001549524 
Protein GI159905862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.289213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TATGTACATT ACTATTAGTA TTTGCACTTG TTTCCGGCTT GAATATGGCT 
TATGCAGATT CTGCTCCTAG CTTACCCCAT ACAATTTATG GGGATGTATC TATTAATGGA
CTTCCCGCAA CGGGAACGTT AAAAGTACTT GTAAACGGAG TGGAAAGTGA GCAAGTGCAA
GTTACTGATG GAGAGTTCGG TAAGGGATTA TTTGATCCCA AACTAGTTGT TAGTGGAGTG
TCAGGGGATA AACTTACATT TTCATTTGAA GCTGAAAGTT ATACAATAAA TCCATCTTAT
AATATATATC TTGTAGATTC AGCTCAGTAC GTTTCAGAAA TCGACTTCGC ATCTGGAGGA
TATACTAAAA TATTATTAGA ATTCACAGGA ACGGCTGACA GTGGTGATAC TGGAGATACC
GGTGACAGTG GTGATACTGG AGATACCGGT GACAGTGGCG ATACTGGAGA TACCGGTGAC
AGTGGCGATA CTGGAGATAC CGGTGACAGT GGCGATACTG GAGATACCGG TGACAGTGGC
GATACTGGAG ATACCGGTGA CAGTGGCGAT ACTGGAGATA CCGGTGACAG TGGCGATACT
GGAGATACCG GTGACAGTGG TGATACTGGA GATACCGGTG ACAGTGGCGA TACTGGAGAT
ACCGGTGACA GTGGATCAAT GCCACTTAAT CCAGAATTAT TCTACGGTTT CGCAACAATT
GGGGAAACCA GTGCTTCAGG AACTTTAAAC GTCTATGTTG ACGATGTACT TCAAGATTCG
ATTGCAGTTC AGAATGGATT ATTTGGGGGA TCAGGACCGC TTGCAGAAAA ACTCGTCGCA
ACTGGATATG TTGGAGAAAC CAATGAGGTT AGGTTCACCC TAGTTTCTGG AGGAGAAACT
TATTCAAGCT TTAGTGCGGA AATAGGTGAA GAAACTTACA CAGATGAACT ACCATACGTT
GAAGGAGTAA AAAACATTGC GATTGAATTT TCAGGAAGTA CAGGAATCTC AGGCGATACT
GGAGATACTG GAGATACCGG TGACAGTGGA TCAATGCCAC TTAATCCAGA ATTATTCTAC
GGTTTCGCAA CAATTGGGGA AACCAGTGCT TCAGGAACTT TAAACGTCTA TGTTGACGAT
GTACTTCAAG ATTCGATTGC AGTTCAGAAT GGATTATTTG GGGGATCATG CACACTTGCA
GAAAAACTCG TCGCAACTGG ATATGTTGGA GAAACCAATG AGGTTAGGTT CACCCTAGTT
TCTGGAGGAG AAACTTATTC AAGCTTTAGT GCGGAAATAG GTGAAGAAAC TTACACAGAT
GAACTACCAT ACGTTGAAGG GGAAGCGTAC TACATGGAAA TAAGTTTTTC TGAATCAACA
GGTGCGGTAG ATAACAATAG TAATTCAAGT AATGATGAAA CAAGTGATTC GTCAATGCCA
CTTTATCCAG AATTATTCTA TGGACTCGTG TATCTGGACG ACACCTTGGC ATCCAGTACA
TTGAATGTAT ATGTTGACGA TGTACTTCAA GATTCAATTG AAATTGAAAA TGGAATATTT
GGAGGAGAAG GACCTCTTGA TGATAAACTG ACTGCAACAG GTTATGAAGG TAATAGTAAC
GTAGTCACGT TTTCACTAGT TTCTGGAGGA GGAACTTATT CAAGCTTTAC TGCAGAATTG
TCAGATGCCA CTTACGAAAA TGAAATTCCT TATGATGAGG GAGTACATTA CGTAATACTC
ACATTCTCAA GTGAAGCTAC TGAAACAGGG GACTCCGCAA GTACTGGAGG TAGCGGATCT
GGAGGAAGTA GTTCAGGTGG CTCTTCGTCA TCAGTTATTA TCAGTTCAGA TTCATCAGAA
CCATCAGCCA CTACCAAAAA TTCAGATTCA GGAACTTTGA CTAAAACTAC TTCATCAGCA
AATCCTGCTG AAACTTCAGA AAATACTGAA CAGAATGCTG CGAAAAATTC ACTGGATATA
TCATCTGATG ATGAAACATA CAGTAATGAA ACGGGAGTAG TTTTACAGCA AGAAAGTCCA
CTTGGCGGAA TAAACCTTTA CCTTGCTATG GCGGCAGCCT TGCTAATATT GATTGCGATA
GCTGCAGCAT GGTATCAGTC AAGAGAAAAA CCAGAAGTTT TGCCTCAGCC ATAA
 
Protein sequence
MKKICTLLLV FALVSGLNMA YADSAPSLPH TIYGDVSING LPATGTLKVL VNGVESEQVQ 
VTDGEFGKGL FDPKLVVSGV SGDKLTFSFE AESYTINPSY NIYLVDSAQY VSEIDFASGG
YTKILLEFTG TADSGDTGDT GDSGDTGDTG DSGDTGDTGD SGDTGDTGDS GDTGDTGDSG
DTGDTGDSGD TGDTGDSGDT GDTGDSGDTG DTGDSGDTGD TGDSGSMPLN PELFYGFATI
GETSASGTLN VYVDDVLQDS IAVQNGLFGG SGPLAEKLVA TGYVGETNEV RFTLVSGGET
YSSFSAEIGE ETYTDELPYV EGVKNIAIEF SGSTGISGDT GDTGDTGDSG SMPLNPELFY
GFATIGETSA SGTLNVYVDD VLQDSIAVQN GLFGGSCTLA EKLVATGYVG ETNEVRFTLV
SGGETYSSFS AEIGEETYTD ELPYVEGEAY YMEISFSEST GAVDNNSNSS NDETSDSSMP
LYPELFYGLV YLDDTLASST LNVYVDDVLQ DSIEIENGIF GGEGPLDDKL TATGYEGNSN
VVTFSLVSGG GTYSSFTAEL SDATYENEIP YDEGVHYVIL TFSSEATETG DSASTGGSGS
GGSSSGGSSS SVIISSDSSE PSATTKNSDS GTLTKTTSSA NPAETSENTE QNAAKNSLDI
SSDDETYSNE TGVVLQQESP LGGINLYLAM AAALLILIAI AAAWYQSREK PEVLPQP