| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1479 |
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| Symbol | |
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| ID | 5737672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1379998 |
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| End bp | 1382151 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641283980 |
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| Product | triple helix repeat-containing collagen |
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| Protein accession | YP_001549524 |
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| Protein GI | 159905862 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.289213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TATGTACATT ACTATTAGTA TTTGCACTTG TTTCCGGCTT GAATATGGCT
TATGCAGATT CTGCTCCTAG CTTACCCCAT ACAATTTATG GGGATGTATC TATTAATGGA
CTTCCCGCAA CGGGAACGTT AAAAGTACTT GTAAACGGAG TGGAAAGTGA GCAAGTGCAA
GTTACTGATG GAGAGTTCGG TAAGGGATTA TTTGATCCCA AACTAGTTGT TAGTGGAGTG
TCAGGGGATA AACTTACATT TTCATTTGAA GCTGAAAGTT ATACAATAAA TCCATCTTAT
AATATATATC TTGTAGATTC AGCTCAGTAC GTTTCAGAAA TCGACTTCGC ATCTGGAGGA
TATACTAAAA TATTATTAGA ATTCACAGGA ACGGCTGACA GTGGTGATAC TGGAGATACC
GGTGACAGTG GTGATACTGG AGATACCGGT GACAGTGGCG ATACTGGAGA TACCGGTGAC
AGTGGCGATA CTGGAGATAC CGGTGACAGT GGCGATACTG GAGATACCGG TGACAGTGGC
GATACTGGAG ATACCGGTGA CAGTGGCGAT ACTGGAGATA CCGGTGACAG TGGCGATACT
GGAGATACCG GTGACAGTGG TGATACTGGA GATACCGGTG ACAGTGGCGA TACTGGAGAT
ACCGGTGACA GTGGATCAAT GCCACTTAAT CCAGAATTAT TCTACGGTTT CGCAACAATT
GGGGAAACCA GTGCTTCAGG AACTTTAAAC GTCTATGTTG ACGATGTACT TCAAGATTCG
ATTGCAGTTC AGAATGGATT ATTTGGGGGA TCAGGACCGC TTGCAGAAAA ACTCGTCGCA
ACTGGATATG TTGGAGAAAC CAATGAGGTT AGGTTCACCC TAGTTTCTGG AGGAGAAACT
TATTCAAGCT TTAGTGCGGA AATAGGTGAA GAAACTTACA CAGATGAACT ACCATACGTT
GAAGGAGTAA AAAACATTGC GATTGAATTT TCAGGAAGTA CAGGAATCTC AGGCGATACT
GGAGATACTG GAGATACCGG TGACAGTGGA TCAATGCCAC TTAATCCAGA ATTATTCTAC
GGTTTCGCAA CAATTGGGGA AACCAGTGCT TCAGGAACTT TAAACGTCTA TGTTGACGAT
GTACTTCAAG ATTCGATTGC AGTTCAGAAT GGATTATTTG GGGGATCATG CACACTTGCA
GAAAAACTCG TCGCAACTGG ATATGTTGGA GAAACCAATG AGGTTAGGTT CACCCTAGTT
TCTGGAGGAG AAACTTATTC AAGCTTTAGT GCGGAAATAG GTGAAGAAAC TTACACAGAT
GAACTACCAT ACGTTGAAGG GGAAGCGTAC TACATGGAAA TAAGTTTTTC TGAATCAACA
GGTGCGGTAG ATAACAATAG TAATTCAAGT AATGATGAAA CAAGTGATTC GTCAATGCCA
CTTTATCCAG AATTATTCTA TGGACTCGTG TATCTGGACG ACACCTTGGC ATCCAGTACA
TTGAATGTAT ATGTTGACGA TGTACTTCAA GATTCAATTG AAATTGAAAA TGGAATATTT
GGAGGAGAAG GACCTCTTGA TGATAAACTG ACTGCAACAG GTTATGAAGG TAATAGTAAC
GTAGTCACGT TTTCACTAGT TTCTGGAGGA GGAACTTATT CAAGCTTTAC TGCAGAATTG
TCAGATGCCA CTTACGAAAA TGAAATTCCT TATGATGAGG GAGTACATTA CGTAATACTC
ACATTCTCAA GTGAAGCTAC TGAAACAGGG GACTCCGCAA GTACTGGAGG TAGCGGATCT
GGAGGAAGTA GTTCAGGTGG CTCTTCGTCA TCAGTTATTA TCAGTTCAGA TTCATCAGAA
CCATCAGCCA CTACCAAAAA TTCAGATTCA GGAACTTTGA CTAAAACTAC TTCATCAGCA
AATCCTGCTG AAACTTCAGA AAATACTGAA CAGAATGCTG CGAAAAATTC ACTGGATATA
TCATCTGATG ATGAAACATA CAGTAATGAA ACGGGAGTAG TTTTACAGCA AGAAAGTCCA
CTTGGCGGAA TAAACCTTTA CCTTGCTATG GCGGCAGCCT TGCTAATATT GATTGCGATA
GCTGCAGCAT GGTATCAGTC AAGAGAAAAA CCAGAAGTTT TGCCTCAGCC ATAA
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| Protein sequence | MKKICTLLLV FALVSGLNMA YADSAPSLPH TIYGDVSING LPATGTLKVL VNGVESEQVQ
VTDGEFGKGL FDPKLVVSGV SGDKLTFSFE AESYTINPSY NIYLVDSAQY VSEIDFASGG
YTKILLEFTG TADSGDTGDT GDSGDTGDTG DSGDTGDTGD SGDTGDTGDS GDTGDTGDSG
DTGDTGDSGD TGDTGDSGDT GDTGDSGDTG DTGDSGDTGD TGDSGSMPLN PELFYGFATI
GETSASGTLN VYVDDVLQDS IAVQNGLFGG SGPLAEKLVA TGYVGETNEV RFTLVSGGET
YSSFSAEIGE ETYTDELPYV EGVKNIAIEF SGSTGISGDT GDTGDTGDSG SMPLNPELFY
GFATIGETSA SGTLNVYVDD VLQDSIAVQN GLFGGSCTLA EKLVATGYVG ETNEVRFTLV
SGGETYSSFS AEIGEETYTD ELPYVEGEAY YMEISFSEST GAVDNNSNSS NDETSDSSMP
LYPELFYGLV YLDDTLASST LNVYVDDVLQ DSIEIENGIF GGEGPLDDKL TATGYEGNSN
VVTFSLVSGG GTYSSFTAEL SDATYENEIP YDEGVHYVIL TFSSEATETG DSASTGGSGS
GGSSSGGSSS SVIISSDSSE PSATTKNSDS GTLTKTTSSA NPAETSENTE QNAAKNSLDI
SSDDETYSNE TGVVLQQESP LGGINLYLAM AAALLILIAI AAAWYQSREK PEVLPQP
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