| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1406 |
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| Symbol | |
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| ID | 5737422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 1309993 |
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| End bp | 1311249 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641283907 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit D |
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| Protein accession | YP_001549451 |
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| Protein GI | 159905789 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00519] L-asparaginases, type I
[TIGR02153] glutamyl-tRNA(Gln) amidotransferase, subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0450215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCG GTGATTTTGT AAAACTCGAA CTGGAAAACA CGACGTATTC TGGAACGTTA
ATGCCTTCTT TAAACGAAAA CACGATTGTA ATCAAAATGA AAAGCGGATA CAACGTTGGA
CTCGATAAGA AAAAAATAAA AAATATTGAA ATTTTGGAAT CCGGAGACAA ACCAAAATAC
GGCCTTCCAC CTCTTAATTT AGAAAAAAAC CCAAAATTAA AAAACATCTC TATTTTATCA
ACTGGGGGAA CAGTTGCTTC AAGAGTGGAC TATAAAACAG GTGCAGTTCA CCCTGCATTT
ACAGCAGATG ATTTAATTCG AGCAGTTCCT GAATTAATGG ACGTTGCAAA CATCAAAGGA
AAAGTTATTT TGAATATTTT AAGTGAAAAC ATGCTTCCAA AATACTGGGC AATGACTGCA
GAAGCGATAA AAGAAGAAAT TGAAAACGGG GCTGAGGGAA TTGTTATTGC ACACGGAACC
GATACTATGC ACTATACTGC ATCAGCACTT TCATTCATGG TAACTTCAGA AGTTCCAATT
ATTTTGGTTG GTGCTCAAAG AAGCAGTGAC AGACCTTCTT CAGATGCAGC ATTAAACATA
ATTGCGGCGG TAAAAGCAGC AACTGAGCCG ATAAAAGGAG TTTATGTATT AATGCACGGT
GAAACTGGCG ATACGGTATG TCATTTACAC GAAGGAACAA AAGTTAGAAA ACTCCACTCA
TCAAGAAGAG ACGCATTCAA ATCAGTAAAT AAAACTCCAA TAGCTGAAGT TAACCCAGTT
ACAAAGGAAG TAAAATATTT AAGAGATGTA AAAAGTCGGG ACAAGTCAAA AATCAAAGAA
GTGGTGTTAA ACACAAATTT GGAAGAAAAA GTTGCTTTAA TTAAAGTTTA TCCTGGAATT
GATTCAGAAA TTTTGAAATT TTATGTTGAT AACGGATACA AAGGAATTAT TTTAGAAGGA
ACTGGACTTG GACACACTCC TGAAACCTTT TTTGAAGGAA TCGATTACGC AAATGAAAAC
AATGTTTTAG TTGCAATGAC TACACAGACG ATCAATGGTC GAGTAAACAT GAATGTTTAT
TCTAATGGGC GAGAACTTCA AGCAAAAGGC GTAATTCCTT GTGAAGACAT GCTTTCAGAA
GTTGCATTTG TTAAATTAAT GCACTTGCTT GGAAATTATG AATTTGAGGA AGCAAAAGAA
TTAATGCCTA AAAACATTGC CGGAGAAATT AACGAATCTA TTAATCTGGA GTGTTAA
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| Protein sequence | MDIGDFVKLE LENTTYSGTL MPSLNENTIV IKMKSGYNVG LDKKKIKNIE ILESGDKPKY
GLPPLNLEKN PKLKNISILS TGGTVASRVD YKTGAVHPAF TADDLIRAVP ELMDVANIKG
KVILNILSEN MLPKYWAMTA EAIKEEIENG AEGIVIAHGT DTMHYTASAL SFMVTSEVPI
ILVGAQRSSD RPSSDAALNI IAAVKAATEP IKGVYVLMHG ETGDTVCHLH EGTKVRKLHS
SRRDAFKSVN KTPIAEVNPV TKEVKYLRDV KSRDKSKIKE VVLNTNLEEK VALIKVYPGI
DSEILKFYVD NGYKGIILEG TGLGHTPETF FEGIDYANEN NVLVAMTTQT INGRVNMNVY
SNGRELQAKG VIPCEDMLSE VAFVKLMHLL GNYEFEEAKE LMPKNIAGEI NESINLEC
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