| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1397 |
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| Symbol | sdhA |
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| ID | 5737687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 1299644 |
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| End bp | 1301263 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641283898 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001549442 |
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| Protein GI | 159905780 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0401599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAACAG ATGTGCTCAT AATTGGCGGT GGCGGTGCTG CAGCAAGGGC GGCAATAGAA
TGCGGGCAGA AAAATGTTGT AATTGCTTCA AAAGGCCTTT TTGGAAAAAG CGGATGCACG
GTAATGGCCG AAGGTGGGTA CAATGCAGTA TTAAATGAAA AAGATTCGTT TGAAAAACAC
TATTCCGACA CGATGAAGGG TGGGGGATAC ATAAACAATA AAAAACTCGT AGAAGTTTTG
ATAAAAAATG CACCAGATGA ATTTAAGAAC TTGGAAAAAT TTGGATGTAT TTTTGACAGG
TCCGAAAGCG CAGAATTTGC ACAAAGGCCG TTTGGGGGAC AGAGCTTTAA TAGGACGTGT
TACAGTGGAG ACAGGACCGG TCACGAAATG ATTTCAGGAT TGATGGAGTA TTTGAATAAA
TTTGAGCGCT TAAAAATTTT AGAAGACACA ATGGCAATAA AATTAATTGT CGACGAAGTA
GAAGAAAACG GAAAAAAACT CAAAAAATGC TTTGGGGCAG TATTTTTAGA TTTATTAAAT
GGCGATATTT ACCCAATCTA TGCAAAATCT ACAATTCTCG CAACAGGTGG GGCAGGGCAG
ATTTATCCGA TAACTTCAAA CCCAAAACAA AAAGTGGGTG ATGGATTTGC GATTGCTTAT
CGTGAAGGCG CCGAATTGGT GGATATGGAA ATGGTTCAGT TTCACCCGAC AGGAATGCTC
GGAACCGGAA TTTTAGTAAC CGAAGCTGTA AGGGGCGAAG GCGGAATTTT ATACAACAAG
AATAAAGAAC GATTTATGAA AAACTACGAT TCCAAAAGAA TGGAATTATC AACAAGAGAT
GTTGTTGCTA AAGCAATATA CAATGAAATT CAGGAAGGTA GGGGAATTGA TGGTGCAGTT
TACTTGGATG TAACTCATCT GAAACCTGAA GTTATCGAAG AAAAGCTCGA AACCATGTTT
TCACAGTTCA AGCTTGTAGG TGTGGACATT AGAAAAGAGC CAATGAAGGT AGCTCCAACA
GCACACCACT TCATGGGCGG AATCAAAATA AACGAAAATT GTGAGACCAG TATTTCTGGA
TTATTTGCAT GCGGAGAAGT TGCAGGTGGA ATTCACGGTG CAAACAGGCT TGGCGGAAAT
GCCCTTGCAG ATACGCAAGT GTTTGGGGCA ATTGCTGGAA AAAATGCGTT TGATAATGCT
GAAAATGAAA TTGATATTTC AAAGGTATAC AATTCAGTTG AAAACTACAT TGAAGATTTG
AAAACTATAT TTAACAATTC AGATTCTGGA GATAATGTAT ATTCATTAAT CGATGAATTA
AAAAAGACAA TGTGGGATTT TGTTTCAATT TTAAGAGACG AAAAAGGATT AAAATTGGCT
CTTGAAAAAA TAACTGAAAT AAAAGGAAAA GCGGTTTTGA TAAATGGAAT CGTGGACTTT
TCAAAAAAAT TGGAACTAGA AAACATGATT TTAGTTTCTG AAATCGTAAT AAATTCAGCT
CTCCTTAGAA AAGAGTCTCG TGGGGCACAT TTTAGAAGTG ATTATCCAGA AACCAATAAA
GAATGCATTG GAAACGTTGT AGCAAGTTTG GACGGAATTA TTTTTGTAAA AATCGAATAA
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| Protein sequence | MITDVLIIGG GGAAARAAIE CGQKNVVIAS KGLFGKSGCT VMAEGGYNAV LNEKDSFEKH
YSDTMKGGGY INNKKLVEVL IKNAPDEFKN LEKFGCIFDR SESAEFAQRP FGGQSFNRTC
YSGDRTGHEM ISGLMEYLNK FERLKILEDT MAIKLIVDEV EENGKKLKKC FGAVFLDLLN
GDIYPIYAKS TILATGGAGQ IYPITSNPKQ KVGDGFAIAY REGAELVDME MVQFHPTGML
GTGILVTEAV RGEGGILYNK NKERFMKNYD SKRMELSTRD VVAKAIYNEI QEGRGIDGAV
YLDVTHLKPE VIEEKLETMF SQFKLVGVDI RKEPMKVAPT AHHFMGGIKI NENCETSISG
LFACGEVAGG IHGANRLGGN ALADTQVFGA IAGKNAFDNA ENEIDISKVY NSVENYIEDL
KTIFNNSDSG DNVYSLIDEL KKTMWDFVSI LRDEKGLKLA LEKITEIKGK AVLINGIVDF
SKKLELENMI LVSEIVINSA LLRKESRGAH FRSDYPETNK ECIGNVVASL DGIIFVKIE
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