Gene MmarC6_1385 details

Gene Information

• Locus tag: MmarC6_1385
• Symbol: rpl10e
• ID: 5737439
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: +
• Start bp: 1289491
• End bp: 1290012
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 641283883
• Product: 50S ribosomal protein L10e
• Protein accession: YP_001549430
• Protein GI: 159905768
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR00279] ribosomal protein L10.e

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 0.447341
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACTAA GACCAGCAAG ATGTTACAGA ACCACAGAAA GAAGATCATA CACAAGAAAA 
GAGTACGTAA GAGCAGTACC ACAACCAAAA GTTGTTCACT ACGTTATGGG AAACTCAAGT 
GTTGAATTCC CTGTAGAAGT ACAGCTTATA TCAAAATCCG ATATCTTGAT CAGACACAAC 
GCTTTAGAAT CCTCAAGGAT TGCAGGTAAC AAATACATTT TAAGAGAATG CGGTAGAACT 
GGATACTTAT TCAACATCAG AGTTTACCCA CACGAAATTT TAAGGGAAAA CAAAATGGCT 
GCAGGAGCAG GTGCGGACAG GATTTCCGAT GGAATGAGAT TATCATTCGG TAAAGCTGTT 
GGAACAGCTG CAAAAGTTAA AAAAGGACAG GAAATCATCA CAATCGGTGT AAACCCTGAA 
AAATTCTACG CTGCAAAAGA AGCATTAAGA AGATGTTCAA TGAAATTACC AACCGCATGT 
AAAATCGTTG TAACAAAAGG ACAAGACTTA ATTAGAGATT AA 

 

Protein sequence

MALRPARCYR TTERRSYTRK EYVRAVPQPK VVHYVMGNSS VEFPVEVQLI SKSDILIRHN 
ALESSRIAGN KYILRECGRT GYLFNIRVYP HEILRENKMA AGAGADRISD GMRLSFGKAV 
GTAAKVKKGQ EIITIGVNPE KFYAAKEALR RCSMKLPTAC KIVVTKGQDL IRD