Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1376 |
Symbol | |
ID | 5737720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 1276586 |
End bp | 1278610 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641283874 |
Product | formate dehydrogenase, alpha subunit |
Protein accession | YP_001549421 |
Protein GI | 159905759 |
COG category | [R] General function prediction only |
COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0754319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTAA ACTTCATTCA TACGATTTGC CCATATTGCG GAACAGGCTG CGGTGTGGAC CTCGTAGTAA AGGATGGGAC ACTTGTTGGG ACCAATCCTT TTAAAAGACA CCCTGTAAAC GAGGGAAAAA CCTGTATTAA AGGTAGTTAT TGTCACGAAT TTGTACACCG TGATGATAGG TTGAAAACTC CATTGATCCG AAAAAATGGA GAATTGGTTG AAGCATCATG GGATGAAGCA CTCGAACTGA TTTCAGGTAA GTTAAAAAAT TATTCCCCTG AAGAAATCGG ATTTTTTTCA TCTGCAAGAT GTACCAATGA AGACAACTAT GTATTTCAAA AATTTGCAAG AACAGTAATG AAAACTAATA ATGTTGATCA CTGTGCGAGA CTTTGACACT CGGCAACTGT GGTCGGTTTA GGGCAAGCCT TTGGTTCAGG TGCTATGACA AATTCAATTT CTGATATAGA AGATGCAGAC TGTATATTCA TAATCGGTTC AAATACGTTT GAACAACACC CTTTGATTGC GAGAAGAGTT GTTCGCGCAA AAGAAAAAGG AACTAAAATA ATTGTAATAG ACCCAAGATA CACACCAACT GCAAAACAGG CTGATTTGTA CTTACAGTTA TTACCGGGTA CAAATATTGC AGTACTAAAT GCAATAATGC ATGTAATTGT GAAAGAAAAT TTGGTCGATG AAGAATTCAT CAAAAATAGG ACAAAAGGAT ACGAAGAACT TAAAAAAACG CTTGAAACTT ATACTCCTGA GTATGCATCA AAATTATCAG GTGTGGCTCC GGAATTAATT GTCGAAGCTG CTAAAATGTA TGGTAGTGCA GGTGCAGCAT CGATACTTTA CTGTATGGGT ATAACGCAGT TCACAACCGG TGTAAACAAC GTAAAATCTT GCTGTAACTT GGCAATGATT ACCGGAAATA TTGGAAAACC TGGAACTGGT GTAAATCCAC TAAGGGGTCA GAATAACGTT CAAGGGGCCT GTGACATGGG TGCACTTCCA AACGTATTCC CTGGCTATCA GGCAGTTCCA GCAAACCATG AAAAATTTGC AGAAGCATGG AATACATCTG TTGATCCAAA TGTCGGTCTT TCGATTCCAG ATATGCTTGC AAAAGCTGGA GAACAGGTTA AATGTATTTA TGTGCTGGGT GAAAACCCAA TGGTATCAGA CCCAGACATT CACCACGTGG AGCATGCGTT GAAAAGCCTT GATTTATTGA TAGTACAGGA CATTTTCTTA ACAGAAACTG CACAAGTTGC AGATGTAGTC TTACCTGGAG CTTCTTGGGC TGAAAAGGAT GGAACTTTCT CAAACACTGA AAGAAGAATC CAAAAAATCA ATAAAGCAGT AGATTCTCCG GGTGAAGCAA TTGCTGACTG GAAAATCGTA AAAATGATTG CTGAAAAGAT GGGTCAAGGA GAATTATTTA ACTTCAACAC TCCTGAAGAA GTATTCCAAG AAATTGCAAA AGTAACTCCT CAGTATGCGG GTGTAACTTA TGAAAGAATT GGTGTAGATG GACTCCACTG GCCATGTAAA ACTTGTGAAG ACCCTGGAAC TCCAATTCTC CACTGTCAAA AATGTTTAAC TCCAGATGGA CTTGGAAACA TCTTTGCAAT AGACTATGCA GATCCAGACG AAATGGCAGA TTCAGAATAC CCAATGACCC TTACAACCGG TAGGATCATT TTCCACTACC ACACCGGAAC AATGACCAGA AGAAGTAAGC ACATGGCTGA TGAAATAAAC GAAGGATTTG TTGAAATTCA TCCAGAAGAT GCCAAAAATA TGGGAATTAA AAATAAACAG AAAGTCAAAG TTTCAACCCG AAGGGGCGAA GTCGTTGTAA ATGCGAAAGT AACACCAAAT ATTAAACAAG GTGTTGTATT TATGCCATTC CACTTTGCAG AAACTGCAGC TAACATCTTA ACAAATCCTG CTCAGGATCC AAACTGTAAA ATCCCAGAAT ACAAGGTATG TGCTGCAAAG GTGGAGAAAA TATAA
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Protein sequence | MELNFIHTIC PYCGTGCGVD LVVKDGTLVG TNPFKRHPVN EGKTCIKGSY CHEFVHRDDR LKTPLIRKNG ELVEASWDEA LELISGKLKN YSPEEIGFFS SARCTNEDNY VFQKFARTVM KTNNVDHCAR LUHSATVVGL GQAFGSGAMT NSISDIEDAD CIFIIGSNTF EQHPLIARRV VRAKEKGTKI IVIDPRYTPT AKQADLYLQL LPGTNIAVLN AIMHVIVKEN LVDEEFIKNR TKGYEELKKT LETYTPEYAS KLSGVAPELI VEAAKMYGSA GAASILYCMG ITQFTTGVNN VKSCCNLAMI TGNIGKPGTG VNPLRGQNNV QGACDMGALP NVFPGYQAVP ANHEKFAEAW NTSVDPNVGL SIPDMLAKAG EQVKCIYVLG ENPMVSDPDI HHVEHALKSL DLLIVQDIFL TETAQVADVV LPGASWAEKD GTFSNTERRI QKINKAVDSP GEAIADWKIV KMIAEKMGQG ELFNFNTPEE VFQEIAKVTP QYAGVTYERI GVDGLHWPCK TCEDPGTPIL HCQKCLTPDG LGNIFAIDYA DPDEMADSEY PMTLTTGRII FHYHTGTMTR RSKHMADEIN EGFVEIHPED AKNMGIKNKQ KVKVSTRRGE VVVNAKVTPN IKQGVVFMPF HFAETAANIL TNPAQDPNCK IPEYKVCAAK VEKI
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