Gene MmarC6_1353 details

Gene Information

• Locus tag: MmarC6_1353
• Symbol: rps4p
• ID: 5737653
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: -
• Start bp: 1255094
• End bp: 1255630
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 641283849
• Product: 30S ribosomal protein S4P
• Protein accession: YP_001549398
• Protein GI: 159905736
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01018] ribosomal protein S4(archaeal type)/S9(eukaryote cytosolic type)

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 0.49235
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAGATC CAAGAAGATT GGGTAAAAAA TACGACACGC CTAACCATCC ATGGATTGGG 
GAAAGAATCC AAAAAGAAAG AGAAATTAGC CAAAAATATG GTTTAGTTAA CAAAAAAGAA 
CTCTGGAAAA TGGAAACCCA ATTAAGGAAC TACAGAAGAC AGGCAAGAAA ATTAATCAGC 
GACACCACAA CACAAGGTGG AAAAGAAGCT GTTCAGTTAT TCAATGTTTT AAAAAGATAC 
GCAATCTTAG TTGAACAAGA ACCAACACTC GACCACGTTC TTTCATTAGA CATTGAAAGT 
ATCTTAGAAA GAAGATTACA GACCATTGTA TACAGAAAAG GTCTCGCTAA AACAGCAAAA 
CAAGCTAGAC AGTTCATCGT TCACGGCCAC ATTGCAGTAA ACGGCAAAAG AGTTACCGCT 
CCAGCATACT TGGTTTCAGT TGCTGAAAAT GATGCGATAG AATACGTGCC TAACTCACCA 
ATGGCTTCAG AAAACCACCC TGAAAGAACT GCCGCAGTAA GCGAAGAAAA TCAATAA 

 

Protein sequence

MGDPRRLGKK YDTPNHPWIG ERIQKEREIS QKYGLVNKKE LWKMETQLRN YRRQARKLIS 
DTTTQGGKEA VQLFNVLKRY AILVEQEPTL DHVLSLDIES ILERRLQTIV YRKGLAKTAK 
QARQFIVHGH IAVNGKRVTA PAYLVSVAEN DAIEYVPNSP MASENHPERT AAVSEENQ