Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1312 |
Symbol | |
ID | 5737285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 1221219 |
End bp | 1222718 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641283807 |
Product | DNA-directed RNA polymerase subunit beta'' |
Protein accession | YP_001549357 |
Protein GI | 159905695 |
COG category | [K] Transcription |
COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTCCC GTGTCGTTGT TGATGCATTT TTTAAAGAGA ACAGTTTAGT AAAACACCAC ATCGATTCCT ACGATGATTT TGTGAAGAAT AAAATTCAAA AGATCATCGA TGAGGTAACT GGTGTCGAAA CAGAAATTAA AGGAGGATAC AAAGTATCCT TTGATAAAGT GAGAGTTACA AAACCGATAA ATAAAGAAGC TGATGGTTCT GTAAAAGAAA TAACACCTAT GGAAGCGAGA ATTAGAAACC TTGCATACTC TGCACCGCTT TACCTTGAAA TGATACCAAC AGTTGGCGAA GATGAAGAAG AAAAAGTATT ATCACCTGTT GAAGTTTACA TTGGAGAACT TCCAGTAATG CTTGGTTCAG AAATCTGCCA CTTGTGCGGA AAATCAGAAG AAGAATTGAT AAAATACGGC GAAGATACAA AAGATCCTTT AGGTTATTTT ATTGTTAACG GTTCAGAAAA AGCGGTTGTT GCTCAAGAAG ACCTTATTCC TAACAGAATT ATATGTGAAA AGGTAGAAAA AAACAACAAA ATCGTAGATA TCGCAAAAGT ATTTTCAACT AGACATGGAT TCAGGGCATT ATGTACTGTT GAGAGAAATC CTGATGGATT ATTAAATGTT TCATTCCCGG GAATGCCTAG CACAATTCCA CTAGTTATAT TAATGAGGGC ACTTGGTGCA GAATCAGATA GGGAGATTAT CGAATTAATT TCGGACGAAC CAACAGTTGT CATGCAATTA ATTGCAAACT TACAGGAAGC AAGAGAAGAG CATGCAATAA ACACGACTGA AGATGCACTC GAACATATCG GAAAAAGAGT AGCTCCAGGA CAGCCTAAAG AATACAAGTT AAAAAGAGCA GAAACAATTC TTTGCAACTA TTTATTACCA CATATGGGCG TAGAATCTGA AAAATTAGGT GCTAAATGTA AATATCTTGG AAGAATGGCT AAAAACTCAA TCGAACTCTA CTTAGGATTA AGGGTTGAAG ATGATAAGGA TCATTATTCA AATAAAAGAT TAAAATTAGC TGGAGACTTG ATGGAAGACT TATTTAGACA TTCATTCAAC CAGTTAATTA AAGATATCAA ATACCAGCTC GAAAGACAGG CAATAAGAAA CAAAGAACCT TCAATTCAGG CTGCAGTTAG AAGCGATGTT TTAACTGAAA GAATGAGACA TGCGATGGCT ACCGGAAACT GGGTAGGTGG AAGAACAGGG GTATCCCAAC TTCTCGATAG AACCAGTTAC CTTGCAACAG TATCCCAGTT AAGAAGAGTT GTATCCCCAC TTTCAAGATC ACAACCTCAC TTCGAAGCAA GGGACTTGCA CGCAACCCAA TGGGGTAAAA TATGTCCATC CGAAACACCA GAAGGTCCAA ACTGTGGTCT GGTAAAAAAC CTTGCTGTAA TGTGCAAAGT AACTACTGAT GAAGGCGACG ATAGCGTAAT CGAATTATTA AGAGAACTCG GTCTCACAAA GGAAAACTAA
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Protein sequence | MESRVVVDAF FKENSLVKHH IDSYDDFVKN KIQKIIDEVT GVETEIKGGY KVSFDKVRVT KPINKEADGS VKEITPMEAR IRNLAYSAPL YLEMIPTVGE DEEEKVLSPV EVYIGELPVM LGSEICHLCG KSEEELIKYG EDTKDPLGYF IVNGSEKAVV AQEDLIPNRI ICEKVEKNNK IVDIAKVFST RHGFRALCTV ERNPDGLLNV SFPGMPSTIP LVILMRALGA ESDREIIELI SDEPTVVMQL IANLQEAREE HAINTTEDAL EHIGKRVAPG QPKEYKLKRA ETILCNYLLP HMGVESEKLG AKCKYLGRMA KNSIELYLGL RVEDDKDHYS NKRLKLAGDL MEDLFRHSFN QLIKDIKYQL ERQAIRNKEP SIQAAVRSDV LTERMRHAMA TGNWVGGRTG VSQLLDRTSY LATVSQLRRV VSPLSRSQPH FEARDLHATQ WGKICPSETP EGPNCGLVKN LAVMCKVTTD EGDDSVIELL RELGLTKEN
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