| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1309 |
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| Symbol | |
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| ID | 5737570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1215416 |
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| End bp | 1216576 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641283804 |
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| Product | DNA-directed RNA polymerase subunit A'' |
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| Protein accession | YP_001549354 |
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| Protein GI | 159905692 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02389] DNA-directed RNA polymerase, subunit A'' |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATGG CTGATTTAGA AAAGAAATTG GAAAATTCTG TCCTGCCACC ATTGTTAAAA
AGAGAGCTTT CAGAAAAAAT CTTAAAAGAA GAAATAAGTG AAGAATACCT CGTTGATGAA
ATCATAAGCG AAACTATAAG AGCTTACGAA AGAACTCTTG TAGAACCTGG AGAAGCAGTC
GGTGTTGTTG CAGCACAATC AATTGGTGAA CCTGGTACGC AGATGACAAT GAGAACGTTC
CACTATGCGG GGGTAGCGGA GTTAAACGTT ACCCTTGGTC TTCCAAGAAT GATTGAAATT
GTAGATGCTA GAAAAGAGCC ATCTACTCCA ACAATGACGA TTTACTTAAA TGATGACTTT
AAAGGCGATA GAGAAAAAGC TTCAATGGTC GCAAAAAACA TTGAAAGTAC CAATGTTGAA
TCTGTTTCAG AAGATATCAG TGTAGATTTG ATAAACGAAT GTATTACAAT CGTATTAAAT
ACACACCAAC TTGAAAGCAG AGGATTGACT GTTGCAGACG TAATCGAATC TATCAAATCC
AAAATGAAAC TTAAAATTGA AGACCATGAA AATGTTCTCA ACTTAAAAAT TAAAACACCT
TCATTAAAAG CATTGAGAAA AAGACTTCCA AAAGTTAGGG CAATCCACTT GAAAGGTGTA
CAAAACATCA AAAGGGTTAT CATCAGAAAA GAAGTTGATG AATACATCCT TTACAGTGAA
GGTTCAAACA TCAAAGAAGT ATTTGATATC GAAGGTGTAG ATACAACAAA AACCACAACA
AACAACATTG TTGAAATTCA AGATGTTTTA GGTATCGAAG CTGCAAGAAA TGCAATCATA
TATGAAATGG ATGCAACCCT TGGAAACCAA GGTCTTACAG TAGACAAAAG ACACTTGATG
ATGGTAGCAG ACCTTATGTG TACAGATGGA GTTGTAAAAC CAATCGGTAG ACATGGTATT
GGTGGTGAAA AAGCATCAGT TCTTGCAAGA GCAGCATTCG AAGAAACTGT AAAACACCTC
TACTCTGCAT CTATGAGAGG ATATGTTGAT GAACTCGGTG GAGTTGTTGA AAACATTATC
GTTGGAAAAC CAATCGCAAT GGGTACTGGC TGTATCGATG TATGCATCGA CAAGACTTAC
GAAGAAGGAA AAGAATTATA A
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| Protein sequence | MQMADLEKKL ENSVLPPLLK RELSEKILKE EISEEYLVDE IISETIRAYE RTLVEPGEAV
GVVAAQSIGE PGTQMTMRTF HYAGVAELNV TLGLPRMIEI VDARKEPSTP TMTIYLNDDF
KGDREKASMV AKNIESTNVE SVSEDISVDL INECITIVLN THQLESRGLT VADVIESIKS
KMKLKIEDHE NVLNLKIKTP SLKALRKRLP KVRAIHLKGV QNIKRVIIRK EVDEYILYSE
GSNIKEVFDI EGVDTTKTTT NNIVEIQDVL GIEAARNAII YEMDATLGNQ GLTVDKRHLM
MVADLMCTDG VVKPIGRHGI GGEKASVLAR AAFEETVKHL YSASMRGYVD ELGGVVENII
VGKPIAMGTG CIDVCIDKTY EEGKEL
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