Gene MmarC6_1294 details

Gene Information

• Locus tag: MmarC6_1294
• Symbol: thyA
• ID: 5737376
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: +
• Start bp: 1202328
• End bp: 1202960
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 641283789
• Product: thymidylate synthase
• Protein accession: YP_001549339
• Protein GI: 159905677
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0207] Thymidylate synthase
• TIGRFAM ID: [TIGR03283] thymidylate synthase, methanogen type

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 0.368464
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGCAT TAAAGAAAAA ATCTGTTAAA TCTGCATTTG AAGCACTTAT ACCAAAAATC 
ATGGAAGAAG GAACTGAAAT GGTTACAGAA GATGGGCAGA AGTGTAAAGA AATAATGAAT 
ACACTTATTG AAATTACTGA TCCATCTGAC AAATCCATTT CAGAAAAATA TCAGCTTGGA 
GAAAGGGCTG TTAAGTCATA TACAGAACAG TTATTGTATG GATCAGCAGC AACATTTGTT 
TACGACTACC ACGAAAGGAT TTTTGAATAT CCAAATGACA AAAAGGAATT AAAAAACGAT 
CAGATTGAAT ATATCGTAAA TAAATTAAAA GAACAGATTA ATTCAAGGCG GGCTGTCGCA 
ATTACCTGGA ATCCATATAT CGACCAAACG GTAAAAGATG TTCCGTGTTT GCAGATCGTG 
CAGTTTTTAG TAAGAGATAA TAAATTATAC CAAACAGTAC TTTTCAGATC CAACGATGCA 
TTTTTGGCAT TTCATGCAAA TGCAATAGGG TTAATTGCTC TTGGTGAAAT GGTTGCTGAA 
AAATTAGGAA TTGAACTTGT AAAATACACG CACCATTCAG TATCTATGCA CGTTTATTCT 
GAACGGGATA CTGATGCTTT AAAAAAGTTT TAA 

 

Protein sequence

MLALKKKSVK SAFEALIPKI MEEGTEMVTE DGQKCKEIMN TLIEITDPSD KSISEKYQLG 
ERAVKSYTEQ LLYGSAATFV YDYHERIFEY PNDKKELKND QIEYIVNKLK EQINSRRAVA 
ITWNPYIDQT VKDVPCLQIV QFLVRDNKLY QTVLFRSNDA FLAFHANAIG LIALGEMVAE 
KLGIELVKYT HHSVSMHVYS ERDTDALKKF