Gene MmarC6_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1293 
Symbol 
ID5737406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp1201136 
End bp1202254 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content32% 
IMG OID641283788 
Productchlorohydrolase 
Protein accessionYP_001549338 
Protein GI159905676 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTATT TAAATTCTAA TTTTTTATAT GGTGACAACT TCGAACCAAA AAAAGGAACC 
TTGGTTATCG AAGACGAAAT TATAAAAGGA TTTACGAGTG AACACCATTC AAACGTTTTA
AATTACAAGG GGTTAGTCAT TCCTCCCCTT ATTAATTCCC ATACTCATAT TGGAGACAAT
AGTATTAAAG ATATTGGTAT TGGAAAGTCA CTTGATGAAC TTGTCAAACC TCCAAATGGC
ATTAAACACA AGTTTTTAAA TAGTTGTAGC GAGAAAGAGT TGGTTCATGG GATGTCAGAA
GGGCTTTATG ACTTAGAAAA TAATGGCATT AAAGCTTTTT GTGACTTTCG TGAAAATGGA
CTTAATGGAA TAAATTTACT TAAATCAGCA TTTGAAGATT CAGATGTATC TATTAAACCC
ATAATTCTTG GAAGGCCCAC TGAAAGGGAA GAAAACCTTT TAAAAAATGA AATAGCCATT
ATCTTGGATA ATTGTGATGG TTTAGGATTA AGCGGTTCAA ATGAGTATTC GGACCAGGAA
CTTAAGTTTA TTTGCAAATT AGTGGACAAA AAAATACTTT CGATTCATGC AAATGAGCAT
AAGGGCTCAG TCCAGTATTC AAAAGAAAAA TATGGAATTT CCGAAATTGA AAGATTGATA
ACTCTAAAAA TAAACCCTGA TTTCATTATC CATGCGACAC ACTCAAGTTC TGACGATCTA
TCCCTGTTAG ATGAAAATAA CATACCCGTT GTAGTATGCC CAAGAGCAAA CGCCGCATTT
AACGTTGGAA TTCCCGATAT GTCCAAAATG TTGGAATACA ATTTAAAACT TGGAATTGGA
ACAGATAACT TTATGGCAAA TTCTCCATCA ATATTTAAGG AAATGGACTT TATCTATAAA
CTTTACCATA TAGATCCAAA AGAAATTCTT AAAATGGCGA CTATAAACGG TGCTGAAATA
CTTGGAGTTC AAAATACCGG ATTGATAAAA GAAGGATATA ATCCAATATT TACGTTTATA
AAAAATGAAA ACATTTTAAA AACATCTAAA AACGTTGTTG CATCCGTGGT AACCAGATTA
GAAAATGGGG ACGTTGATTC AAAGTTTTTA GTTTGTTAA
 
Protein sequence
MVYLNSNFLY GDNFEPKKGT LVIEDEIIKG FTSEHHSNVL NYKGLVIPPL INSHTHIGDN 
SIKDIGIGKS LDELVKPPNG IKHKFLNSCS EKELVHGMSE GLYDLENNGI KAFCDFRENG
LNGINLLKSA FEDSDVSIKP IILGRPTERE ENLLKNEIAI ILDNCDGLGL SGSNEYSDQE
LKFICKLVDK KILSIHANEH KGSVQYSKEK YGISEIERLI TLKINPDFII HATHSSSDDL
SLLDENNIPV VVCPRANAAF NVGIPDMSKM LEYNLKLGIG TDNFMANSPS IFKEMDFIYK
LYHIDPKEIL KMATINGAEI LGVQNTGLIK EGYNPIFTFI KNENILKTSK NVVASVVTRL
ENGDVDSKFL VC