| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1290 |
|---|
| Symbol | |
|---|
| ID | 5737641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 1197736 |
|---|
| End bp | 1198260 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641283785 |
|---|
| Product | coenzyme F420-reducing hydrogenase delta subunit |
|---|
| Protein accession | YP_001549335 |
|---|
| Protein GI | 159905673 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00130] coenzyme F420-reducing hydrogenase delta subunit (putative coenzyme F420 hydrogenase processing subunit). |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.673562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATATA AACTAACCCC TTCTTACCTT TTAAAGGAAA ATATGGTTCT TGCATGCGGA
AATATCCTAT TTGCAGACGA TGGATTCAGT GTCCATGTAA TCGAAAAATT ACAGGAACTA
TTGACTGAAG AAGAAAAAGA AAATATTGCA CTGGTAGATG CCGGAGCAGG TGCTCCACAA
CAGGTGCTCA CTTTAATCGA CAGTGAAGCT AGGACTAAAA GAATTATAGT CGTAGATATT
ATCGATTACG GACTAGAACC GGGAGAAATT AAGATACTTA CTATGGATGA CCTTCCAAAA
CCAGAACATA CAAAAGTTGA CAGTCATGAC TGGCCGCTCT CAACTACCAT GTACAGAGTA
TTTAGAGATG CACCTCATGA AATAGACTTT AAAGTTATCG GTTGTCAGAA AAAGTACGTT
TCAGAACCTG ATGTAGTACT TGAACTGTCA GAAGAAGTCC AAAATGCAGT AGATGTAGCC
GTAGACATAG TACTTTCCGA ATTAAGGGGA AAACCAATCA ACTAA
|
|---|
| Protein sequence | MEYKLTPSYL LKENMVLACG NILFADDGFS VHVIEKLQEL LTEEEKENIA LVDAGAGAPQ
QVLTLIDSEA RTKRIIVVDI IDYGLEPGEI KILTMDDLPK PEHTKVDSHD WPLSTTMYRV
FRDAPHEIDF KVIGCQKKYV SEPDVVLELS EEVQNAVDVA VDIVLSELRG KPIN
|
|---|
| |