Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1289 |
Symbol | |
ID | 5739029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 1197035 |
End bp | 1197721 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641283784 |
Product | coenzyme F420 hydrogenase, subunit gamma |
Protein accession | YP_001549334 |
Protein GI | 159905672 |
COG category | [C] Energy production and conversion |
COG ID | [COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit |
TIGRFAM ID | [TIGR03294] coenzyme F420 hydrogenase, subunit gamma |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAAAG TTGCCCACGT GCAATTAAGT AGCTGCTGTG GGTGTCTAGT TTCCCTTGCA GACACCTATG AAAAGCTTTT AGATGTTTTA GGAGCTATAG ATTTAGTTTA CTCCCAGACT CTTGCTGATG TGAGAGAAGT TCCTGACGAT GTAGACATAA TCTTATTAGA AGGTAGCGTT TGTTTAAGCG ACCACCACGC AATGGAAGTT GCACTTGATT CCAGAAAAAA AGCAAAAATA TTAGTTGCTT TAGGGGCTTG TGCTGCTACT GGAAACGTTA CAAGATTTTC AAAAGGAAAT CAGCCATCAA AACCAGTTCA CGATGCATTT GCACCATTGA CTGAAGTTGT AAAATGTGAC TTGGCAATTC CAGGATGTCC ACCATCACCA GAATCTATAG TTGCAGTAGT TTTGGCGGCA TTAAACGGTG ATATGGAATA TTTAGAACCA TATGCAGAAC TTGCAAAATA TGGATCAGAA GCTTGTGGAT GCGATTTAAT TACAAAAGTA ATTAATAAAT CACTCTGTAT GGGATGCGGT TCATGTGCAG CAGCATGCCC TACAAGAGCA GTATCTATGG ATGCAGGAAG ACCATTAGTT GACAAGGAAA TCTGTATAAA ATGTGGTTCA TGTTCAGTTC AATGCCCAAG AATTAGATTC CCTGAATTAA TTGAAAAAAT AGAATAA
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Protein sequence | MVKVAHVQLS SCCGCLVSLA DTYEKLLDVL GAIDLVYSQT LADVREVPDD VDIILLEGSV CLSDHHAMEV ALDSRKKAKI LVALGACAAT GNVTRFSKGN QPSKPVHDAF APLTEVVKCD LAIPGCPPSP ESIVAVVLAA LNGDMEYLEP YAELAKYGSE ACGCDLITKV INKSLCMGCG SCAAACPTRA VSMDAGRPLV DKEICIKCGS CSVQCPRIRF PELIEKIE
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