Gene MmarC6_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1279 
Symbol 
ID5737516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand+ 
Start bp1188464 
End bp1189120 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content29% 
IMG OID641283774 
Product3-dehydroquinate dehydratase, type I 
Protein accessionYP_001549324 
Protein GI159905662 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0710] 3-dehydroquinate dehydratase 
TIGRFAM ID[TIGR01093] 3-dehydroquinate dehydratase, type I 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.02452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTGTA TTCCTGTAAT TGATGAAAAT GTGTCTGATG CAATAAATTC CGCAAAAGAA 
GCTTTAAAAT ATGGAGATAT TGTTGAATTT AGGGTAGATT TATTAAATGA TGTAACGTTT 
GAAGATATCG AAAAGTTTTC AAAAATTCCA TCTATACTCA CAATAAGGGC AGAATGGGAA 
GGTGGAGCTT GGAAAAAGTC AGATAATGAA AGAATTGAAC TTTTAAAATA CGCGATAAAA 
AATAACGCGA AATTTATAGA TATTGAATTA AAAGAAGAAA GAAATTTAGA ATTAGTTAAA 
TATAGAAATG AAATTGGATC GAAAACAAAA ATTATCGTTT CATATCACGA TTTTGAAAAA 
ACTCCCGAAA TAGATGAATT AATAGATGTA GTCGAAAAAG AGTTAAAAAT CGGAGACATT 
GCAAAATTTG CAACATTTGC ACATTCAAAA GAAGATACTT TAAAAATATT AAATTTGATG 
AACAAGTATT CTGGAAAAAT AATTGCAATT GGTATGGGCG AATCAGGAAA ACTTACCAGG 
ATTTTGGGTT TAGATTTTGG ATCAATACTT ACATTTGCAT CAATGGAGGG AAAAGCATCA 
GCTCCCGGCC AGGTTGACGT TAAAAAACTA AAAGAAATTT TAGAATTAAT CGAATAA
 
Protein sequence
MICIPVIDEN VSDAINSAKE ALKYGDIVEF RVDLLNDVTF EDIEKFSKIP SILTIRAEWE 
GGAWKKSDNE RIELLKYAIK NNAKFIDIEL KEERNLELVK YRNEIGSKTK IIVSYHDFEK 
TPEIDELIDV VEKELKIGDI AKFATFAHSK EDTLKILNLM NKYSGKIIAI GMGESGKLTR 
ILGLDFGSIL TFASMEGKAS APGQVDVKKL KEILELIE