Gene MmarC6_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1276 
Symbol 
ID5737995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp1180777 
End bp1184346 
Gene Length3570 bp 
Protein Length1189 aa 
Translation table11 
GC content32% 
IMG OID641283771 
Productchromosome segregation protein SMC 
Protein accessionYP_001549321 
Protein GI159905659 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02169] chromosome segregation protein SMC, primarily archaeal type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.526592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCAT TATCAGAAAT CCATATGAAA AACTTCAAAT CATTTAAAAA TTCAAAACTA 
AAAATTCCCG ACGGCTTCAC TGCAATACTG GGGCCAAATG GATCAGGAAA ATCGAACACC
ATTGATGGTA TTTGTTTTGT TCTTGGTAAA ACTTCAGCAA AATCACTTCG TGCAGGTAAA
TTCAACCAAC TTATTACTTA CCACAACGGA AAAAGGGAAA GTTTCGCGGA AGTTACGCTT
TTTTTTGATA ATAAAGATAG AAAAATGCCT GTAGAGTCAA ATAAGGTAGG CATATCAAGA
AAAGTTAAAA TAAACGGTGA CAACAACTAC TACCTCATAT GGGATGAAGA AAAAGAAGTT
AAAGAAAACG GGGAAATAAA AAAAATAATG GAAGAAAAAC GGAAAAAAGT AAAAAAATCT
GAAATTTTGG ACTTCATTGG AAAAATTTCC CTAAGCGCTG ACGGATTTAA TATCATACTT
CAAGGAGACC TCATAAAAAT TATAGATACT ACCCCAAATG AAAGAAGAAA AATTATCGAT
GAAATAAGCG GTGTCGCAGA ATTTGATGAA AAAGGGGAAA AAGCGGAAAA AGAACTTGAA
AAAGCTAGAG AATTTATTGA AAAAATCGAT ATCAGGATTA ATGAAGTAAA AAATAACCTT
GAAAAACTTA GAAAGGAAAA AGAAGACGCT GAAATATACG TCAAATTATC AGAAGAATTA
AAAGCTACAA AATATATTCT AACTTCGAAA AAAATCGATT TTTTAAATGG TGTTTTGGAA
AAAACTAAAG AAGAAATCGA AGCTCTTAAA GAAATGAAAG TCTGTTTCTT AAAAGAAATT
TCTGAATACG ATGTAAAATC AAATAATATT AGAAATCGGC TTCAAAATTT AATAAATGAG
CTAAATGAAA AAGGAAATGA AGAAATCATG GAACTTCACA AATCCATTAA AGAAATGGAA
GTAACAGTTG ATAATGACAA AAAATCTCTA AATGGGGCTC TTGATGACCT AAAAAATGTA
AATTCACAGT CAGAAAAAAA AGGACAGGAT TTAGTGGAAA CTCGACAAAA AATAGAAACT
ATAAGGACTG AAACACTTCA AAAAGAAGCA GAAATTAACA CAATAAAGAC CGAAATGGAA
AATCTTGAAG TTGAAAAGAA GAAATTGAAG TCAAAAGTCG AAGAAAGTGA AACCCAGACT
GAACTTTTAA AACAGCAAGA AAGAAAAATA TCTGAAAGAA TAAATGAAAG TCAGAACGAA
CTTTACAATT TAAAAAATGA ATTTAACTCC CTTGAAAATG AAATCAATAA AAAATCATTT
AATTTAACTA AAAATAAAGA AACCATTGAA ACTTTGCAGA AAGAACTCAA TGACATAAAA
GCAGAAAGTG AAGATACAAA GGTACTATAC AAAGAACTTG AAGACGTTGC TGTTGAACTC
GAATACTCTA AAAAGAAAGT TATCACACTT TTAGAGGATA AAAAAGAGTA TCAAGAAAAA
TTGGATAAAT CTCACGCTGA TTACATTAAA GAAAATGCTA AAATCAAAGC AATGAAAGAT
ATGGAAGATT TCAGTCTTGA TAGGGCTGTA AAAAGCGTTC TTGAAGCAAA ATTACCGGGG
GTAGTAGATA TTGCAGGAAA CCTTGGAAAG ACTGATGCCG AATACAAAAC TGCAATTGAA
AATGCAGGTG GAAACAGGCT TAACTACATC GTTGTAAAAA GAATGGATGA TGGTGCAAGG
GCAATTCAGT ATTTAAAAAA GAATAACCTT GGCAGAACCA CATTTTTACC ATTGGATAGA
ATCAATGGTC CAGAAGCTCT TTATCTGGAT GACGAAGGTG TCGTTGGAAG AGCAATTGAT
CTAGTTGAAT TTAAACCTGA ATACGAAGAC CTATTTAGAT ACATATTTGG AAACACGATA
ATTGTTGAAA ACTTAGATTA TGCGAAAATA TTGTCAAAAG ACCACAGGGC ACGATTTGTA
ACCCTTGAAG GGGAAGTTAT CGAACCATCC GGTGCAATGA TTGGTGGGCA TTCAAGAAAA
AAATCAGTTA TTAAAGTAGA TATTGATACT TCAAGAATTG AAAAACTTGC AGAACAGATT
TCAGAACTTG ATAATACATT ATCTGAAACT AAAGATGAAA TTGAACGCCT TCAAAACAAA
AATGCAACAT ATTCGACAAG GAAAATGGAA CTTGAAAGCA GATTAAAGAT TATTCGCGAT
ATGGAAAATA GAAAAGAAGG AATACTGACA AACAACGGAA TAAAAATTAA AGAGCTTGAA
TTGGAATCCA AGAAGTTAGA AGAAGAACTT GATTATTTAG AAGGCTCAAA AGAAGAACTT
GAAAGAAAGA TTAATGAATA CACTAAAAAA ATTAGTGGAT TTACAGCCCA AAGAGACAGA
ATTTCTGAAG AAATTTCATC TTTTGAAAAT TCAGAGCATT CCAAAAGAAT CAAAGTAATT
GATGAAACTA TCCTTAATTT TGAAAAGAAA AAGAATGAAT TTGAAAACGA AATAAAACGG
GACGCAGTAC TTATTAAAGA AGTTTTGATC CCGAAAATAA GCGAATTGAA TAGTAATATA
AAAGAATTAA GCGAAAAAAG AGTAATTCTC GAACAGAACA TTCAATTCTA CAAAAACAAT
GTAGAAAAGA ACTTCGAAAT TCTGAAAAAC AAAAAAGAAC GCTACGAAGA ACTCACAAAA
GATTTAAGAG AACTTACTGA AAAGAAGGAA GCTTTTGAAA AAGAACTGGA AATGTTAAAT
GGCGAGAAAA GAAGAATTTA TGGAAGAATT AACCAGAACG AAAGCCAGAT CAACAGCCTT
TCAATCGATA TGGCAAAGTA CGAAACCAGA CTTGAAGAAG AAGATAGAAA ATTGTACGTT
TGTGAAAATA TCGAACATAT ATCTGAAGAT ATTACTTCCA AAATAAAAGA ATTTGACGTA
GATGCCCTTG AAAGCCATCA AATCGACCTT GAAGGAAATA TCAAAAAATT AGAACCAATA
AACATGCGTG CCATTGATGA CTACCAGTAC ATCGTCGATA GGTACGATGA ACTCTTCGAA
AAAAGAACAG ATTATGAAAA TGAAGAGAAA AAATACCTGC AGTTAATCGA AGAAGTAAGT
AAACGGAAAA AAGAAGTATT TATGGATGTT TACGTAAGAG TTGCTGAAAA TTACGAAAAG
ATATATAATG AAATTGGAGG AAGTGGAAAA TTAAGTCTTG AAAATCCGGA CGATCCATTT
TCAGGCGGTT TATTAATTGA TGCTTCGCCA ATGAATAAAA AATTGCAAAG TTTAGATGTA
ATGAGTGGCG GTGAAAAATC ACTTACTGCA CTTGCATTCC TGTTTGCAAT TCAGCATTTG
AATCCAGCTC CGTTCTATGT GCTTGATGAG GTTGATGCTG CACTCGATAC GAAAAATGCA
GGATTAATCG GTGAAATGAT TAAAAATGCA TCAAAAAATT CACAGTTCAT CGTAATATCT
CACCGTGAAC AGATGATAAG TAAATCTGAC GTGATGTATG GGGTTTGTAT GGAAAATGGA
CTTAGTAAAT TAGTCGGATT AAAAATATAA
 
Protein sequence
MASLSEIHMK NFKSFKNSKL KIPDGFTAIL GPNGSGKSNT IDGICFVLGK TSAKSLRAGK 
FNQLITYHNG KRESFAEVTL FFDNKDRKMP VESNKVGISR KVKINGDNNY YLIWDEEKEV
KENGEIKKIM EEKRKKVKKS EILDFIGKIS LSADGFNIIL QGDLIKIIDT TPNERRKIID
EISGVAEFDE KGEKAEKELE KAREFIEKID IRINEVKNNL EKLRKEKEDA EIYVKLSEEL
KATKYILTSK KIDFLNGVLE KTKEEIEALK EMKVCFLKEI SEYDVKSNNI RNRLQNLINE
LNEKGNEEIM ELHKSIKEME VTVDNDKKSL NGALDDLKNV NSQSEKKGQD LVETRQKIET
IRTETLQKEA EINTIKTEME NLEVEKKKLK SKVEESETQT ELLKQQERKI SERINESQNE
LYNLKNEFNS LENEINKKSF NLTKNKETIE TLQKELNDIK AESEDTKVLY KELEDVAVEL
EYSKKKVITL LEDKKEYQEK LDKSHADYIK ENAKIKAMKD MEDFSLDRAV KSVLEAKLPG
VVDIAGNLGK TDAEYKTAIE NAGGNRLNYI VVKRMDDGAR AIQYLKKNNL GRTTFLPLDR
INGPEALYLD DEGVVGRAID LVEFKPEYED LFRYIFGNTI IVENLDYAKI LSKDHRARFV
TLEGEVIEPS GAMIGGHSRK KSVIKVDIDT SRIEKLAEQI SELDNTLSET KDEIERLQNK
NATYSTRKME LESRLKIIRD MENRKEGILT NNGIKIKELE LESKKLEEEL DYLEGSKEEL
ERKINEYTKK ISGFTAQRDR ISEEISSFEN SEHSKRIKVI DETILNFEKK KNEFENEIKR
DAVLIKEVLI PKISELNSNI KELSEKRVIL EQNIQFYKNN VEKNFEILKN KKERYEELTK
DLRELTEKKE AFEKELEMLN GEKRRIYGRI NQNESQINSL SIDMAKYETR LEEEDRKLYV
CENIEHISED ITSKIKEFDV DALESHQIDL EGNIKKLEPI NMRAIDDYQY IVDRYDELFE
KRTDYENEEK KYLQLIEEVS KRKKEVFMDV YVRVAENYEK IYNEIGGSGK LSLENPDDPF
SGGLLIDASP MNKKLQSLDV MSGGEKSLTA LAFLFAIQHL NPAPFYVLDE VDAALDTKNA
GLIGEMIKNA SKNSQFIVIS HREQMISKSD VMYGVCMENG LSKLVGLKI