Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1276 |
Symbol | |
ID | 5737995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 1180777 |
End bp | 1184346 |
Gene Length | 3570 bp |
Protein Length | 1189 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641283771 |
Product | chromosome segregation protein SMC |
Protein accession | YP_001549321 |
Protein GI | 159905659 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.526592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCAT TATCAGAAAT CCATATGAAA AACTTCAAAT CATTTAAAAA TTCAAAACTA AAAATTCCCG ACGGCTTCAC TGCAATACTG GGGCCAAATG GATCAGGAAA ATCGAACACC ATTGATGGTA TTTGTTTTGT TCTTGGTAAA ACTTCAGCAA AATCACTTCG TGCAGGTAAA TTCAACCAAC TTATTACTTA CCACAACGGA AAAAGGGAAA GTTTCGCGGA AGTTACGCTT TTTTTTGATA ATAAAGATAG AAAAATGCCT GTAGAGTCAA ATAAGGTAGG CATATCAAGA AAAGTTAAAA TAAACGGTGA CAACAACTAC TACCTCATAT GGGATGAAGA AAAAGAAGTT AAAGAAAACG GGGAAATAAA AAAAATAATG GAAGAAAAAC GGAAAAAAGT AAAAAAATCT GAAATTTTGG ACTTCATTGG AAAAATTTCC CTAAGCGCTG ACGGATTTAA TATCATACTT CAAGGAGACC TCATAAAAAT TATAGATACT ACCCCAAATG AAAGAAGAAA AATTATCGAT GAAATAAGCG GTGTCGCAGA ATTTGATGAA AAAGGGGAAA AAGCGGAAAA AGAACTTGAA AAAGCTAGAG AATTTATTGA AAAAATCGAT ATCAGGATTA ATGAAGTAAA AAATAACCTT GAAAAACTTA GAAAGGAAAA AGAAGACGCT GAAATATACG TCAAATTATC AGAAGAATTA AAAGCTACAA AATATATTCT AACTTCGAAA AAAATCGATT TTTTAAATGG TGTTTTGGAA AAAACTAAAG AAGAAATCGA AGCTCTTAAA GAAATGAAAG TCTGTTTCTT AAAAGAAATT TCTGAATACG ATGTAAAATC AAATAATATT AGAAATCGGC TTCAAAATTT AATAAATGAG CTAAATGAAA AAGGAAATGA AGAAATCATG GAACTTCACA AATCCATTAA AGAAATGGAA GTAACAGTTG ATAATGACAA AAAATCTCTA AATGGGGCTC TTGATGACCT AAAAAATGTA AATTCACAGT CAGAAAAAAA AGGACAGGAT TTAGTGGAAA CTCGACAAAA AATAGAAACT ATAAGGACTG AAACACTTCA AAAAGAAGCA GAAATTAACA CAATAAAGAC CGAAATGGAA AATCTTGAAG TTGAAAAGAA GAAATTGAAG TCAAAAGTCG AAGAAAGTGA AACCCAGACT GAACTTTTAA AACAGCAAGA AAGAAAAATA TCTGAAAGAA TAAATGAAAG TCAGAACGAA CTTTACAATT TAAAAAATGA ATTTAACTCC CTTGAAAATG AAATCAATAA AAAATCATTT AATTTAACTA AAAATAAAGA AACCATTGAA ACTTTGCAGA AAGAACTCAA TGACATAAAA GCAGAAAGTG AAGATACAAA GGTACTATAC AAAGAACTTG AAGACGTTGC TGTTGAACTC GAATACTCTA AAAAGAAAGT TATCACACTT TTAGAGGATA AAAAAGAGTA TCAAGAAAAA TTGGATAAAT CTCACGCTGA TTACATTAAA GAAAATGCTA AAATCAAAGC AATGAAAGAT ATGGAAGATT TCAGTCTTGA TAGGGCTGTA AAAAGCGTTC TTGAAGCAAA ATTACCGGGG GTAGTAGATA TTGCAGGAAA CCTTGGAAAG ACTGATGCCG AATACAAAAC TGCAATTGAA AATGCAGGTG GAAACAGGCT TAACTACATC GTTGTAAAAA GAATGGATGA TGGTGCAAGG GCAATTCAGT ATTTAAAAAA GAATAACCTT GGCAGAACCA CATTTTTACC ATTGGATAGA ATCAATGGTC CAGAAGCTCT TTATCTGGAT GACGAAGGTG TCGTTGGAAG AGCAATTGAT CTAGTTGAAT TTAAACCTGA ATACGAAGAC CTATTTAGAT ACATATTTGG AAACACGATA ATTGTTGAAA ACTTAGATTA TGCGAAAATA TTGTCAAAAG ACCACAGGGC ACGATTTGTA ACCCTTGAAG GGGAAGTTAT CGAACCATCC GGTGCAATGA TTGGTGGGCA TTCAAGAAAA AAATCAGTTA TTAAAGTAGA TATTGATACT TCAAGAATTG AAAAACTTGC AGAACAGATT TCAGAACTTG ATAATACATT ATCTGAAACT AAAGATGAAA TTGAACGCCT TCAAAACAAA AATGCAACAT ATTCGACAAG GAAAATGGAA CTTGAAAGCA GATTAAAGAT TATTCGCGAT ATGGAAAATA GAAAAGAAGG AATACTGACA AACAACGGAA TAAAAATTAA AGAGCTTGAA TTGGAATCCA AGAAGTTAGA AGAAGAACTT GATTATTTAG AAGGCTCAAA AGAAGAACTT GAAAGAAAGA TTAATGAATA CACTAAAAAA ATTAGTGGAT TTACAGCCCA AAGAGACAGA ATTTCTGAAG AAATTTCATC TTTTGAAAAT TCAGAGCATT CCAAAAGAAT CAAAGTAATT GATGAAACTA TCCTTAATTT TGAAAAGAAA AAGAATGAAT TTGAAAACGA AATAAAACGG GACGCAGTAC TTATTAAAGA AGTTTTGATC CCGAAAATAA GCGAATTGAA TAGTAATATA AAAGAATTAA GCGAAAAAAG AGTAATTCTC GAACAGAACA TTCAATTCTA CAAAAACAAT GTAGAAAAGA ACTTCGAAAT TCTGAAAAAC AAAAAAGAAC GCTACGAAGA ACTCACAAAA GATTTAAGAG AACTTACTGA AAAGAAGGAA GCTTTTGAAA AAGAACTGGA AATGTTAAAT GGCGAGAAAA GAAGAATTTA TGGAAGAATT AACCAGAACG AAAGCCAGAT CAACAGCCTT TCAATCGATA TGGCAAAGTA CGAAACCAGA CTTGAAGAAG AAGATAGAAA ATTGTACGTT TGTGAAAATA TCGAACATAT ATCTGAAGAT ATTACTTCCA AAATAAAAGA ATTTGACGTA GATGCCCTTG AAAGCCATCA AATCGACCTT GAAGGAAATA TCAAAAAATT AGAACCAATA AACATGCGTG CCATTGATGA CTACCAGTAC ATCGTCGATA GGTACGATGA ACTCTTCGAA AAAAGAACAG ATTATGAAAA TGAAGAGAAA AAATACCTGC AGTTAATCGA AGAAGTAAGT AAACGGAAAA AAGAAGTATT TATGGATGTT TACGTAAGAG TTGCTGAAAA TTACGAAAAG ATATATAATG AAATTGGAGG AAGTGGAAAA TTAAGTCTTG AAAATCCGGA CGATCCATTT TCAGGCGGTT TATTAATTGA TGCTTCGCCA ATGAATAAAA AATTGCAAAG TTTAGATGTA ATGAGTGGCG GTGAAAAATC ACTTACTGCA CTTGCATTCC TGTTTGCAAT TCAGCATTTG AATCCAGCTC CGTTCTATGT GCTTGATGAG GTTGATGCTG CACTCGATAC GAAAAATGCA GGATTAATCG GTGAAATGAT TAAAAATGCA TCAAAAAATT CACAGTTCAT CGTAATATCT CACCGTGAAC AGATGATAAG TAAATCTGAC GTGATGTATG GGGTTTGTAT GGAAAATGGA CTTAGTAAAT TAGTCGGATT AAAAATATAA
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Protein sequence | MASLSEIHMK NFKSFKNSKL KIPDGFTAIL GPNGSGKSNT IDGICFVLGK TSAKSLRAGK FNQLITYHNG KRESFAEVTL FFDNKDRKMP VESNKVGISR KVKINGDNNY YLIWDEEKEV KENGEIKKIM EEKRKKVKKS EILDFIGKIS LSADGFNIIL QGDLIKIIDT TPNERRKIID EISGVAEFDE KGEKAEKELE KAREFIEKID IRINEVKNNL EKLRKEKEDA EIYVKLSEEL KATKYILTSK KIDFLNGVLE KTKEEIEALK EMKVCFLKEI SEYDVKSNNI RNRLQNLINE LNEKGNEEIM ELHKSIKEME VTVDNDKKSL NGALDDLKNV NSQSEKKGQD LVETRQKIET IRTETLQKEA EINTIKTEME NLEVEKKKLK SKVEESETQT ELLKQQERKI SERINESQNE LYNLKNEFNS LENEINKKSF NLTKNKETIE TLQKELNDIK AESEDTKVLY KELEDVAVEL EYSKKKVITL LEDKKEYQEK LDKSHADYIK ENAKIKAMKD MEDFSLDRAV KSVLEAKLPG VVDIAGNLGK TDAEYKTAIE NAGGNRLNYI VVKRMDDGAR AIQYLKKNNL GRTTFLPLDR INGPEALYLD DEGVVGRAID LVEFKPEYED LFRYIFGNTI IVENLDYAKI LSKDHRARFV TLEGEVIEPS GAMIGGHSRK KSVIKVDIDT SRIEKLAEQI SELDNTLSET KDEIERLQNK NATYSTRKME LESRLKIIRD MENRKEGILT NNGIKIKELE LESKKLEEEL DYLEGSKEEL ERKINEYTKK ISGFTAQRDR ISEEISSFEN SEHSKRIKVI DETILNFEKK KNEFENEIKR DAVLIKEVLI PKISELNSNI KELSEKRVIL EQNIQFYKNN VEKNFEILKN KKERYEELTK DLRELTEKKE AFEKELEMLN GEKRRIYGRI NQNESQINSL SIDMAKYETR LEEEDRKLYV CENIEHISED ITSKIKEFDV DALESHQIDL EGNIKKLEPI NMRAIDDYQY IVDRYDELFE KRTDYENEEK KYLQLIEEVS KRKKEVFMDV YVRVAENYEK IYNEIGGSGK LSLENPDDPF SGGLLIDASP MNKKLQSLDV MSGGEKSLTA LAFLFAIQHL NPAPFYVLDE VDAALDTKNA GLIGEMIKNA SKNSQFIVIS HREQMISKSD VMYGVCMENG LSKLVGLKI
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