| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1254 |
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| Symbol | rps5p |
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| ID | 5738183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1170001 |
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| End bp | 1170690 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641283749 |
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| Product | 30S ribosomal protein S5P |
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| Protein accession | YP_001549299 |
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| Protein GI | 159905637 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0153949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAAA AAAAGGCTGA AAAAAGAGCT GAAAAAAGAA AATTCAATAC CGAAGCTTGG
GAACCAAAAA CTCAAATCGG TAGAATGGTT AAGGAAGGAA CAATTTCAGA CATTAATTAC
ATTATGGATA AAGGTCTTCC CTTATTAGAA CCTGAAATTG TTGATGCACT CTTACCAGAC
TTAGAAGAGC AAGTTTTGGA CGTTAAATTG GTTCAAAGAA TGCACAAATC TGGAAGAAGA
GCTAGATACA GAGCAACTGT TGTTGTTGGT AACAAAAACG GTTACGTTGG AGTAGGCATG
GGTAAATCAA AAGAAGTTGG CCCTGCTATC AGAAAAGCAA TTGCTCACGC AAAATTATCA
TTAATAAAAG TTAGAGTTGG CTGCGGTTCA TGGGAATGCG GTTGCGGATC CCCTCACTCA
ATCCCATTCA CAGCTAAAGG AGCTTGCGGT AGCGTTAAAG TCGAATTACT CCCTGCACCT
AGAGGTGTTG GTTTAGTTGC TGGTAACGTT GCAAAAGCTG TTTTAGGTCT TGCAGGAATA
AAAGATGCAT GGACTAAAAC CTTTGGTGAC ACAAGAACCA CATACAACTT TGCTGAAGCT
ACATTCGATG CATTAAACAA CTTAAACTTC GTAAGATGCT TACCTGCACA AAAGGAAAAA
TTAGGTCTTA CAGAAGGAAG AGTACTCTAA
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| Protein sequence | MAEKKAEKRA EKRKFNTEAW EPKTQIGRMV KEGTISDINY IMDKGLPLLE PEIVDALLPD
LEEQVLDVKL VQRMHKSGRR ARYRATVVVG NKNGYVGVGM GKSKEVGPAI RKAIAHAKLS
LIKVRVGCGS WECGCGSPHS IPFTAKGACG SVKVELLPAP RGVGLVAGNV AKAVLGLAGI
KDAWTKTFGD TRTTYNFAEA TFDALNNLNF VRCLPAQKEK LGLTEGRVL
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