Gene MmarC6_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1244 
Symbol 
ID5738914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp1160640 
End bp1160957 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content38% 
IMG OID641283739 
Producttranscription termination factor Tfs 
Protein accessionYP_001549289 
Protein GI159905627 
COG category[K] Transcription 
COG ID[COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS 
TIGRFAM ID[TIGR01384] transcription factor S, archaeal 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0156946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGAAT TTTGTCCAAA ATGTAACAAT ATCATGCTCC CAAAAGCAGG AGTTTTAAAA 
TGTGTAGTTT GCAAACACGA AGAAGAACTC GGCGATGCAA ATCAGGAATA TGCTTTAAAA
GAAAAAATAG AATCTAAAAA ACAGGATGTT ACGGTTATTG AAAATGTAGA CACCCTTCCA
ACAACAAGAA TAGAGTGTCC GGCTTGCGGA AACATGGAAG CATTCTGGTG GTTACAGCAG
ACAAGATGTG CTGACGAGCC CGAAACCAGA TTTTACAAGT GTAAAAAATG TAGCCATACA
TGGAGAGAAT ATGATTAA
 
Protein sequence
MVEFCPKCNN IMLPKAGVLK CVVCKHEEEL GDANQEYALK EKIESKKQDV TVIENVDTLP 
TTRIECPACG NMEAFWWLQQ TRCADEPETR FYKCKKCSHT WREYD