Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1244 |
Symbol | |
ID | 5738914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 1160640 |
End bp | 1160957 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641283739 |
Product | transcription termination factor Tfs |
Protein accession | YP_001549289 |
Protein GI | 159905627 |
COG category | [K] Transcription |
COG ID | [COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS |
TIGRFAM ID | [TIGR01384] transcription factor S, archaeal |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0156946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCGAAT TTTGTCCAAA ATGTAACAAT ATCATGCTCC CAAAAGCAGG AGTTTTAAAA TGTGTAGTTT GCAAACACGA AGAAGAACTC GGCGATGCAA ATCAGGAATA TGCTTTAAAA GAAAAAATAG AATCTAAAAA ACAGGATGTT ACGGTTATTG AAAATGTAGA CACCCTTCCA ACAACAAGAA TAGAGTGTCC GGCTTGCGGA AACATGGAAG CATTCTGGTG GTTACAGCAG ACAAGATGTG CTGACGAGCC CGAAACCAGA TTTTACAAGT GTAAAAAATG TAGCCATACA TGGAGAGAAT ATGATTAA
|
Protein sequence | MVEFCPKCNN IMLPKAGVLK CVVCKHEEEL GDANQEYALK EKIESKKQDV TVIENVDTLP TTRIECPACG NMEAFWWLQQ TRCADEPETR FYKCKKCSHT WREYD
|
| |