Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1188 |
Symbol | |
ID | 5738063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 1115739 |
End bp | 1116542 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641283682 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001549233 |
Protein GI | 159905571 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.765639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTATTT CACTAATGGG TTATACTATA TCTATAGATC TGTTTTTAAT TGTTAAGGCT ATTTTGGTAC TTTTTCTAGG ATACTTGGCT GTAAAAATTG TATCAGGAAT GTTAGAAAAA GGGGCTAAAA AAAGCAAGAT CCCAGAACTG GTTTCTGAAT TTGTTATTAA ACTATTTAGC GCAATACTGT ATATATTTGT GATATTACTT GCAGTAGGTC TTTTTGGTGT TGAAACAGGG CCAATAATTT TGGGACTTTC CGCATCGCTT GGCCTAATTT TGGGTTTTGG TTTACAAGAT ACACTTACAA ACTTAACATC TGGCCTTTGG ATTGCAGTTA TGAGGCCACT TGATAAAGGG GAAACTGTTC AAATAGGTGG AATGACTGGA AACGTTGTTG AAGTTGGAAT AATGGCAACT AAACTTTTAA CACCGGACAA TGTAGTTATT ACACTTCCAA ATAAGCTAGT TTGGGGAAGT CCGATAACTA ATTACACGAG AATGGACTTA AGAAGAGTAG ACATTGCGGT TGGAGTTAGC TATGGTGAAA ATTTAGACAA TGCAGTATCT AAAGCACTAG AACTTATTTC TGGACATCCT TTAGTATTAA AAGATCCTGC ACCCATGGCT GCTATAACTG GTCTAGGCAG TTCTTCAGTA GATTTACAGC TTAGGGCTTG GACAAAAACC AGCGATTACT GGACTGTAAA AGGAGATCTT ACAAAAGGAA TCTACGAAAA ATACGGAAAA GAGGGTATCG AAATTCCATT CCCACAAATG GATGTACATA TCCACAAATA TTAA
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Protein sequence | MPISLMGYTI SIDLFLIVKA ILVLFLGYLA VKIVSGMLEK GAKKSKIPEL VSEFVIKLFS AILYIFVILL AVGLFGVETG PIILGLSASL GLILGFGLQD TLTNLTSGLW IAVMRPLDKG ETVQIGGMTG NVVEVGIMAT KLLTPDNVVI TLPNKLVWGS PITNYTRMDL RRVDIAVGVS YGENLDNAVS KALELISGHP LVLKDPAPMA AITGLGSSSV DLQLRAWTKT SDYWTVKGDL TKGIYEKYGK EGIEIPFPQM DVHIHKY
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