| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1186 |
|---|
| Symbol | |
|---|
| ID | 5738065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 1112785 |
|---|
| End bp | 1114161 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641283680 |
|---|
| Product | peptidase U62 modulator of DNA gyrase |
|---|
| Protein accession | YP_001549231 |
|---|
| Protein GI | 159905569 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTTTTT TAAACGAACT TGACTTAAAC ATTGAAAAAC TTGAAAAATT ACTTGAAATT
GGAACTTACG CAGATTTAAG AATTGTTTCC GGTGAATCAA ATAATATCAT CCAAAAAGAT
GGAATAATCG ATGAAATTTC TTCTGGAATG TCTTCTGGCG TGATTATAAG GGTGCTTGAA
AAAAACGGAT GGGGTTTTGC AACCTCAAAT AATGTTTCTT TGAAAAATAT TGAAGAAATA
ATAAAAAAAG CGCATAATAT GGCAAAAATA TCAAATACAC ACACTAAAAA ATCGATAGAA
TTAAAAGATG TTCCGGTAAT TTGTGATAAT GTAAAAGCGG ATGTAAAAAT CCATCCAGAT
ACAATTTCGA TCGAAGAAAA AAAGGAATAT TTGAAATCAG CGCATGAAAA CATGTCTGGG
GAAAAAATAG TTAGCACTTC CATAAGTTAC AGTGATGGGG AAGGCCATTC TATTTTAATG
ACCAGTGAAG GAACAAAAAT TGAAAATGAA AGTGTTAAGG CTCTTTTGAG AATGACTGCC
ATTGCAAAAG ATGGAACTTT GCAGTTTGCA TTTGATAGAA TCGGTGGAAA CGGATTTGAA
ATAATTAAAA ATGCAAAAAT TGAAGAAATG GCTAAAAGTA CAAAAGAAAG AGCCATAAGA
CTTTTAACTG CTGAAAGCTG TCCAAAAGGA ACTTTTGATG TAATACTGGA CCCAGAACTT
GCAGGAGTAT TCATTCACGA AGCAGTTGGT CACGCTGCTG AAGCAGACCT TGTTTTACAA
AATGACAGTG TTTTTCACGA TAAGCTTGGA AATTCCGTTG GTAGCGAACA CGTAACTGTA
ATTGATGATG CCACAATTGA AAAATCATTT GGGCAGTACA AATACGACCA TGAAGGAGTT
AAGGGTAAAA AAACTACATT AATTGAAAAT GGAGTATTAA ACGGGTACTT ACATTCAAGA
GAAACTGCTG GAAGACTTAA CATGGACGTT ACAGGAAATG CAAGAGCAGA TGGACTCAAT
AGGCCAATTG TCAGAATGAG TAACACATAC ATCAAGCCGG GTTCATGGAA ATTTGACGAA
CTTTTAGAAG ATACGAAAAC AGGAATATTT TTGAAAGGTT CAAGAGGAGG ACAGGTCGAT
ACTGGAAAAG GATTATTCCA GTTTAACGCT GTTGAAGCAT TTTTAATTGA AGATGGAATT
TTAACTAAAC CACTTAGGGA TGCTGGACTC AGCGGTGAAA TTTTAGATAT TTTACACCAT
ATCGATGCAG TGTCTGATGA ATTTGAATTA AGCGTTGGTT ACTGTGGAAA AGGAGGCCAG
AGCGTTCCAG TAGGGGACGG TGGAGGAAGT GTTAGAACAA AAACTACACT TTCATAA
|
|---|
| Protein sequence | MSFLNELDLN IEKLEKLLEI GTYADLRIVS GESNNIIQKD GIIDEISSGM SSGVIIRVLE
KNGWGFATSN NVSLKNIEEI IKKAHNMAKI SNTHTKKSIE LKDVPVICDN VKADVKIHPD
TISIEEKKEY LKSAHENMSG EKIVSTSISY SDGEGHSILM TSEGTKIENE SVKALLRMTA
IAKDGTLQFA FDRIGGNGFE IIKNAKIEEM AKSTKERAIR LLTAESCPKG TFDVILDPEL
AGVFIHEAVG HAAEADLVLQ NDSVFHDKLG NSVGSEHVTV IDDATIEKSF GQYKYDHEGV
KGKKTTLIEN GVLNGYLHSR ETAGRLNMDV TGNARADGLN RPIVRMSNTY IKPGSWKFDE
LLEDTKTGIF LKGSRGGQVD TGKGLFQFNA VEAFLIEDGI LTKPLRDAGL SGEILDILHH
IDAVSDEFEL SVGYCGKGGQ SVPVGDGGGS VRTKTTLS
|
|---|
| |