Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1173 |
Symbol | |
ID | 5738206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 1099428 |
End bp | 1099919 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 641283666 |
Product | phosphodiesterase |
Protein accession | YP_001549218 |
Protein GI | 159905556 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.111939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCATCG GACTCATTTC AGATACCCAT ATTCCAGAAA GAGCTAAAAA ACTTCCAAAA GAAATTTTCG AACACTTTTC TGATGTAAAT TTGATAATAC ATTGTGGGGA CGTAACGTCT GAATCTGTTT TAAACGATCT GGAAAAAATC AGCGAAATTC TGGTTGTTTC TGGAAACATG GATGTTATGA ATTATCCAAA AGAACAGGAA TTAGTTATTG AAAATTTCAA AATAGGAATA ATCCATGGAA ATCAGATCCA TCCGCGTGGA GATACCTTAA AAATGAAGTA TCTATGCATT GAAAAAAATT GGGATATTTT AATTTCTGGT CACACCCATA TTCCCATGAT TAAAGAAATA AATGTTGAAA ATAAAAAAAT ATTACTTTTA AATCCAGGAA GCCCGACTGT TCCAAGATAT CCATTAAAAA CCATTATGAA ATTAAAAATA GAAGATAAAA AAATTGATGC AGAGTTAATT CCTGTAAAAT AA
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Protein sequence | MIIGLISDTH IPERAKKLPK EIFEHFSDVN LIIHCGDVTS ESVLNDLEKI SEILVVSGNM DVMNYPKEQE LVIENFKIGI IHGNQIHPRG DTLKMKYLCI EKNWDILISG HTHIPMIKEI NVENKKILLL NPGSPTVPRY PLKTIMKLKI EDKKIDAELI PVK
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