| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1143 |
|---|
| Symbol | |
|---|
| ID | 5738268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 1071751 |
|---|
| End bp | 1073001 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641283636 |
|---|
| Product | aspartate aminotransferase |
|---|
| Protein accession | YP_001549188 |
|---|
| Protein GI | 159905526 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGTT ACATTCAAAA TTTGTTCGCT GAAAGAATTG GCGGCAAAAG CTTTGGAAAA
GAAGATGTAA TCTACAAATT CGAAAAAATT AAAAGAGCAA AACAGGCTGC GAAATTAAAG
TACCCCGACA TGGAATTAAT CGACATGGGC GTTGGGGAAC CTGATGAAAT GGCTGACGAG
TCCGTAGTTG AAGTTTTATG CGAAGAAGCA AAAAAACACG AAAACAGAGG ATATTCAGAC
AACGGTGTTC AGGCATTAAA AGATGAAATC CCACTTTACA TGGAAAAAGT CTTTGGAGTT
AAAGATTTAG ACCCTGTAAA CGAAGTAGTT CACTCAATTG GATCAAAACC TGCTTTAGCA
TACATTACAT CAGTATTTAT CAATCCTGGC GATGTAACCT TAATGACCGT TCCAGGATAC
CCGGTTACTG CAACGCACAC CAAATGGTAC GGTGGAAGTG TAGAAACATT ACCCTTACTC
GAAAAAAATA ACTTCTTGCC AGAACTCGAT GCAATTTCAA AAGACGTTAG GGAAAAAGCA
AAAATTCTCT ACTTAAACTA CCCAAACAAC CCAACTGGTG CACAGGCTAC CAAAAAATTC
TACAAGGAAG CAGTTGATTT TGCATTTGAA AACGATTTAA TTGTTATTCA AGATGCGGCA
TACGCTGCAT TAACTTACGG CGACAAACCG CTTTCATTCC TCACGGTAAA AGATGCAAAA
GAAGTTGGTG TTGAAATTCA CAGCTTTTCA AAAGCATACA ACATGACCGG ATGGAGACTT
GCATTCTTTG CAGGAAACGA ACTTATCGTA AGAGGATTTG CAGCAGTTAA GGATAATTAC
GATAGCGGAC AGTTCATCCC GATCCAAAAA GCAGGAATTC ACTGTTTAAG ACACCCGGAA
ATTACTGAAA AAACAAGGGC AAAATACGAA AGAAGACTTT CAAAAATGGT TAAAATCTTA
AAAGAAGCAG GATTTAACGC AAAAATGCCT GGAGGAACAT TCTACCTCTA CGTGAAAGCT
CCAATCGGAA CAAAAGATGG CACTAAATTT GCAAATGCTG AAGAATTCTC ACAGTTCATG
ATAAAAGAAA AACTTATTTC AACTGTGCCT TGGGACGATG TAGGCCACTT TGTAAGAATG
GCAGCATGCT TTGAAGCATT CAAAGACGGC GAAATTTCAA TCGAAGAAGA AGACAGAATC
TTAAACGAAG TTAAAAGAAG ATTAACTGAA GTAGAATTTG TTTTCGAATA A
|
|---|
| Protein sequence | MESYIQNLFA ERIGGKSFGK EDVIYKFEKI KRAKQAAKLK YPDMELIDMG VGEPDEMADE
SVVEVLCEEA KKHENRGYSD NGVQALKDEI PLYMEKVFGV KDLDPVNEVV HSIGSKPALA
YITSVFINPG DVTLMTVPGY PVTATHTKWY GGSVETLPLL EKNNFLPELD AISKDVREKA
KILYLNYPNN PTGAQATKKF YKEAVDFAFE NDLIVIQDAA YAALTYGDKP LSFLTVKDAK
EVGVEIHSFS KAYNMTGWRL AFFAGNELIV RGFAAVKDNY DSGQFIPIQK AGIHCLRHPE
ITEKTRAKYE RRLSKMVKIL KEAGFNAKMP GGTFYLYVKA PIGTKDGTKF ANAEEFSQFM
IKEKLISTVP WDDVGHFVRM AACFEAFKDG EISIEEEDRI LNEVKRRLTE VEFVFE
|
|---|
| |