| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1122 |
|---|
| Symbol | |
|---|
| ID | 5739005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 1056167 |
|---|
| End bp | 1056742 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641283615 |
|---|
| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit |
|---|
| Protein accession | YP_001549168 |
|---|
| Protein GI | 159905506 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
|---|
| TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAATTAA AAACACCAAT TTCAAAGGAA GACGTTAAAA AACTTAAAGT TGGGGATATC
GTGTATTTAA GCGGCGATAT CTGTACAGGA AGGGATGAAG CACATATAAC AACAATTGAA
GAAAAAAAAC CTCCAATAAA TCTTGAAAAC GGAGTAATTT ATCATGCAGG CCCGATAATG
AAAAAAGAGA AAAATGGCAA GTGGACATGT GTTGCCATTG GGCCGACAAC ATCTGCTCGA
ATGAATGGAC TCGAAGAAGA CTTCATAAGG ATTACAAATA TATCTGCAAT TGTTGGAAAA
GGTGGTATGG ATGATAAGCT TTTGAAAACT TTTGAAGAAT CAGGTGTAAT TTATCTTGCA
GCACCAGGGG GTTGTGCAGC ACTTTTAGCA GATTCAGTAA AAAACGTAAA AAACGTTTAT
CATCTTGAAC TTGGGATGCC AGAAGCGTTC TGGGAACTAA GTGTTGAAAA TTTTGGACCA
TTAATTGTTG CAATGGACTC TCACGGAAAT AGTATTTATA CTAAAGTTAA TGAAGACGCC
GATAAAAATT TAGAAAATAT TCTAAAAAAG TTATAA
|
|---|
| Protein sequence | MQLKTPISKE DVKKLKVGDI VYLSGDICTG RDEAHITTIE EKKPPINLEN GVIYHAGPIM
KKEKNGKWTC VAIGPTTSAR MNGLEEDFIR ITNISAIVGK GGMDDKLLKT FEESGVIYLA
APGGCAALLA DSVKNVKNVY HLELGMPEAF WELSVENFGP LIVAMDSHGN SIYTKVNEDA
DKNLENILKK L
|
|---|
| |