| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1119 |
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| Symbol | |
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| ID | 5737875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 1052893 |
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| End bp | 1054245 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641283612 |
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| Product | signal recognition particle protein Srp54 |
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| Protein accession | YP_001549165 |
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| Protein GI | 159905503 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.227466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGATA AATTAGGCCA GAATCTCTCT GAAGCACTAA ACAAAATTAA GAACGCTACT
TTTGTCGATA AAAAACTCGT AAAAGAAGTA ATTAAAGATA TCCAGAAAGC TTTAATCCAG
TCCGACGTTA ATGTAAAGCT CGTATTTAAC ATGAGCAAGG AAATTGAGAG AAAAGCTATC
GAAGAAGCAC CTCCAAAGGG ACTCTCAAAA AAAGAACACA TTGTAAAAAT TGTTTACGAT
GAACTCGTTA AATTGCTTGG AGAAACCATT CAAAAGTTAG AACTCGATGC TTCGAAAAAA
TCTGTAATTT TACTTATTGG TATTCAGGGA AGCGGTAAAA CAACGAGTGC TGCAAAACTT
GCAAGATATA TCCAGAAAAA AGGTTTAAGA CCGGGATTAA TTGCAGCGGA TGTTTACAGA
CCTGCAGCAT ACCAGCAGTT AAAACAGCTA TCTGAAAAAA TAAACGTTCC ACTATTTGGT
GATGAAACAA GAACAAAAAC GCCTGTAGAT ATTACTAAAG AAGGAATGGA AAAACTAAAA
AAAGTAGATG TTATAATCAT CGATACAGCA GGTAGGCACA AGGAAGAAGA AGGTCTTTTA
GCTGAAATGA AAGAAATGAA AGATTTAACT AATCCAAATG AAATAATCCT TGTAATTGAT
GGAACTTTAG GTCAGCAGGC TAAAAATCAA GCAAAAGCAT TCAAAGATTC AGTTTCAGAA
ATTGGGAGTA TTCTGGTTAC AAAATTAGAT GGTTCTGCAA AAGGTGGTGG TGCTTTAAGT
GCTGTTGCAG AAATCAATGC CCCAATTAAA TTTATCGGAA CTGGTGAAGG AGTCGACAAT
TTAGAACAGT TCGACCCAAA AAAATTTATA TCGAGAATTC TCGGATTTGG GGATTTAGAT
TCCCTTTTAG AAAAGACTGA AGATATAATG GACGAATCAG CGGAAGAAAG TATTGATTCT
ATTTTAAAGG GTAAATTTAC ATTGATCGAG CTTTACGCAC AGCTTGAAAC AATATCAAAA
ATGGGTCCAA TGAAGCAGAT TTTAAGTATG ATTCCTGGAA TGGGCGGAAA CATGCCGAAA
GAAGCTGCGC AGTTAACCGA GGATAAATTA AAAAGATACA AAATCATGAT GGACTCAATG
ACGATGGAAG AAAAAGAAAA TCCCGAACTT ATAAAAACTT CAAGACTTCA GAGGATTGCA
AGGGGTGCTG GAGTAAAACC GGAAGAGATA AAGGACCTTT TAAAATATTA TTCAACGACC
AAAAATGCGT TTGGAAATTT GAAGCGCGGA AAAATGCCAA AAATGGGCGG ACAGATGGGC
CAGATAATGA GGCAGTTGAT GTATAAAGAT TAA
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| Protein sequence | MLDKLGQNLS EALNKIKNAT FVDKKLVKEV IKDIQKALIQ SDVNVKLVFN MSKEIERKAI
EEAPPKGLSK KEHIVKIVYD ELVKLLGETI QKLELDASKK SVILLIGIQG SGKTTSAAKL
ARYIQKKGLR PGLIAADVYR PAAYQQLKQL SEKINVPLFG DETRTKTPVD ITKEGMEKLK
KVDVIIIDTA GRHKEEEGLL AEMKEMKDLT NPNEIILVID GTLGQQAKNQ AKAFKDSVSE
IGSILVTKLD GSAKGGGALS AVAEINAPIK FIGTGEGVDN LEQFDPKKFI SRILGFGDLD
SLLEKTEDIM DESAEESIDS ILKGKFTLIE LYAQLETISK MGPMKQILSM IPGMGGNMPK
EAAQLTEDKL KRYKIMMDSM TMEEKENPEL IKTSRLQRIA RGAGVKPEEI KDLLKYYSTT
KNAFGNLKRG KMPKMGGQMG QIMRQLMYKD
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