| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1111 |
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| Symbol | |
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| ID | 5738076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1044715 |
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| End bp | 1046376 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641283602 |
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| Product | methyl-coenzyme M reductase, alpha subunit |
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| Protein accession | YP_001549157 |
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| Protein GI | 159905495 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4058] Methyl coenzyme M reductase, alpha subunit |
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| TIGRFAM ID | [TIGR03256] methyl-coenzyme M reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCTG AAAAAAGATT ATTCTTGAAA GCATTAAAGG AAAAATTCGA AGAAGACCCA
AAAGAAAAGT ACACAAAATT CTATACCTAT GGCGGTTGGG AACAATCCGC TAGGAAAAGG
GAATTCGTTG AAGCTAATGA AAAAATATTA GCTGAAAAAA GACAGGGAGT ACCCCTCTAC
AACCCAGACA TTGGTGTTCC TCTCGGACAA AGAAAATTAA TGCCTTACAA ATTGTCAAAC
ACTGACGACT ACTGTGAAGG TGACGACTTA CACTTCATGA ACAACGCTGC TATCCAACAG
TTATGGGACG ATATCAGAAG AACTGTTATT GTAGGTATGG ACACTGCTCA CTCAGTTTTA
GAAAAAAGAT TGGGTGTAGA AGTAACACCA GAAACAATCA ACGAATACAT GCACACAATC
AACCACGCTC TTGCAGGTGG TGCGGTTGTT CAAGAACACA TGGTTGAAGT TCACCCTTCC
CTTGCATGGG ACTGTTACGC TAGAATCTTC ACCGGTGACG ATGAATTAGC TGACGAATTA
GATGACAGAT TCTTAATTGA CATCAACAAA TTGTTCCCTG AAGAACAAGC TGAAGCTTTA
AAAGCTGCAA TCGGTAAAAA AACATACCAA GTATCAAGAG TTCCATCACT CGTAGGTAGA
GTATGTGACG GTGGTACAAT TTCAAGATGG TCTGCAATGC AGATCGGAAT GTCATTCATT
ACCGCATACA AACTTTGTGC AGGGGAAGCT GCAACAGCTG ACTTCTCATA CGCTTCAAAA
CACGCTGACG TAATTCAGAT GGGTAACGCT TTACCAGGAA GAAGAGCAAG AGGGCCAAAC
GAACCAGGAG GAATCCAGTT CGGTATTCTC TCAGATGTTG TACAGACAAC AAGAGTTTCA
GATGACCCAG TTGAGCAGTC ATTAGAAGTA GTAGCAACAG GTGCTGCTTT ATACGACCAA
ATCTGGCTCG GTGCATACAT GTCTGGTGGT GTAGGATTCA CACAATATGC TACCGCATCA
TACACCGACG ATATCTTAGA TGACTTCTCA TACTACGGAT TAGATTACGT AGAGAAAAAA
TACGGTAGAA TGGGAACAAA AGCTACAATG GATGTAGTAG AAGACATTGC TGGTGAAGTT
ACACTCTACG CATTAGAACA GTACGATGAA TACCCAGCAT TATTAGAAGA CCACTTCGGT
GGATCACAAA GAGCTGCGGT TGCTGCTGCT GCATCAGGTA TCAGCGTATG TATGGCAACA
GGTAACTCAA ACGCTGGTGT AAACGGCTGG TACTTATCAC AAATCTTACA CAAAGAATAC
CACAGCAGAC TCGGATTCTA CGGTTACGAC TTGCAGGACC AGTGTGGTGC TTCAAACTCA
CTCGCAATCA GAAACGACGA AGCTGCACCT CTTGAATTAA GAGGACCTAA CTACCCTAAC
TACGCAATGA ACGTAGGTCA CCAGGGAGAA TACGCAGGTA TTGCACAATC TGCTCACTCC
GCAAGAGGAG ACGCATTTGC AATGAACCCA CTTATTAAAG TTGCATTCGC TGACCCAATG
CTCGTATTCG ACTTCTCCAA ACCTAGAAAA GAGTTTGCTA GAGGAGCATT AAGAGAATTC
GAAGCTGCAG GAGAAAGAGA CATTATATTA CCTGCTAAAT AA
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| Protein sequence | MEAEKRLFLK ALKEKFEEDP KEKYTKFYTY GGWEQSARKR EFVEANEKIL AEKRQGVPLY
NPDIGVPLGQ RKLMPYKLSN TDDYCEGDDL HFMNNAAIQQ LWDDIRRTVI VGMDTAHSVL
EKRLGVEVTP ETINEYMHTI NHALAGGAVV QEHMVEVHPS LAWDCYARIF TGDDELADEL
DDRFLIDINK LFPEEQAEAL KAAIGKKTYQ VSRVPSLVGR VCDGGTISRW SAMQIGMSFI
TAYKLCAGEA ATADFSYASK HADVIQMGNA LPGRRARGPN EPGGIQFGIL SDVVQTTRVS
DDPVEQSLEV VATGAALYDQ IWLGAYMSGG VGFTQYATAS YTDDILDDFS YYGLDYVEKK
YGRMGTKATM DVVEDIAGEV TLYALEQYDE YPALLEDHFG GSQRAAVAAA ASGISVCMAT
GNSNAGVNGW YLSQILHKEY HSRLGFYGYD LQDQCGASNS LAIRNDEAAP LELRGPNYPN
YAMNVGHQGE YAGIAQSAHS ARGDAFAMNP LIKVAFADPM LVFDFSKPRK EFARGALREF
EAAGERDIIL PAK
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