| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1105 |
|---|
| Symbol | |
|---|
| ID | 5738078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 1040130 |
|---|
| End bp | 1040891 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641283596 |
|---|
| Product | tetrahydromethanopterin S-methyltransferase subunit A |
|---|
| Protein accession | YP_001549151 |
|---|
| Protein GI | 159905489 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4063] Tetrahydromethanopterin S-methyltransferase, subunit A |
|---|
| TIGRFAM ID | [TIGR01111] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A
[TIGR02507] tetrahydromethanopterin S-methyltransferase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00015052 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATA AAAAAGCCCC AGCAGCAGGA TGGCCTGTTG CTACCGGTGA ATATGTGGTT
GGTAACCCTG AAAGCTGTGT TGCAGTTATT ACGCTCGGTT CACACGGTTT GGACCAGGCT
GCAATTGAAG CAGGTGCAGC TATTTCAGGA CCATGCCACA CAGAAAACTT AGGAATTGAA
AAAGTTGTTG TAAACTACAT TTCAAACCCA AACATCCGAT TTGTGGTAGT TGCTGGATCA
GAAGTTCAAG GACACATTAC TGGACAATGT ATCGTAGCAT TATACGAAAA TGGAATTGGT
GACGATGGAG GTATCATCGG CGCTAAAGGA GCTATTCCTT TCATGGAAAA CGTAGGAAAA
GAACCAGTTG GTAGACTCCA ATCACAAATT GTTGAATTAA TCAATTTAAT TGATACTGAA
GACACTGGAA AAATTGCAGC TGCTGTCAAA AACTGTATCT CAAAAGATCC AGGAGCATTT
GATGGAGAAC CAATGATTAT TGAATTAGAC GGTGGTGGAG CTGCGGCTAG TGAAGATGAA
GGAGGCCTCG TAATTGAAGG TATCCCTACT GTAGCAGAGC CAGACATTGA ATCAATAAAA
GCATTAAACG AAGCATTGGA TTACAAAGTA GGATTGATGA CAAGAGACAT TGGATTAGCT
TCCGGTGTTC AAACTGAAAC CGTTACAGGA TTAATGTACG GATCAGTATT TGCTATCGCA
TTAGTTGCAA TCCCAATAGC TTTAAAATTC ATAATGGGGT GA
|
|---|
| Protein sequence | MADKKAPAAG WPVATGEYVV GNPESCVAVI TLGSHGLDQA AIEAGAAISG PCHTENLGIE
KVVVNYISNP NIRFVVVAGS EVQGHITGQC IVALYENGIG DDGGIIGAKG AIPFMENVGK
EPVGRLQSQI VELINLIDTE DTGKIAAAVK NCISKDPGAF DGEPMIIELD GGGAAASEDE
GGLVIEGIPT VAEPDIESIK ALNEALDYKV GLMTRDIGLA SGVQTETVTG LMYGSVFAIA
LVAIPIALKF IMG
|
|---|
| |