| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1086 |
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| Symbol | |
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| ID | 5738106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1024518 |
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| End bp | 1025360 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641283577 |
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| Product | spermidine synthase |
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| Protein accession | YP_001549132 |
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| Protein GI | 159905470 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTG ATGCATGGTA TACGGAACCA CAAACTGAAA ATTTAAGCCT TTCAACTAAA
TTAAAAGATA TCATCTATGT TGGACAGTCC GAATATCAAG AAATTCAGGT TCTTGATACT
TACGAATTTG GAAGAGTTTT GATTTTAGAA AACACGTACC AAACTAGTGA AAGAGACGAA
TTTATATACC ACGAATTGAT TTCACATCCT GCACTCTTTA CTCACGGAAA CCCTAAAAAA
GTTCTTGTTA TCGGCGGTGG AGATGGGGGA ACTGTTAGGG AAGTTTTAAA ACATGAAAGT
GTTGAAAAAA TAGACTTCGT TGAACTCGAT GGACAGGTTG TAGAAGTTGC TAAAAAATTC
CTTCCAACCT TAAGCTGCGA AATAGACAAC GAAAAAGTAA ACACAATTAT CACGGATGGA
ATAAAATACG TTGCAGAAAC TTCTGAAAAA TACGATGTGA TCCTCGTAGA CTGCCCTGAC
CCAGTAGGTC CTGCTGCAGG ATTATTCGAA AAAGAATTCT ACAAAAACCT CTTCAAATGC
TTAAATGAAG ACGGAATCAT GGTACAACAA ACTGAAAGCC CACTTTTACA CGAAAAATTG
ATAAATAAAA TCAAAGGACA CTTAAAAGAT GCTGGCTTTT CAACGATCAG ACCACTCGTT
TGCAGCATTC CAACATACCC AAGTGGATTC TGGAGCTTTA CTTTGGCTTC AAAGAAAAAC
GACCCATTAA CTTCAGATGT TTCAGAAATT GAAAATAAAT TAAAAGACAT GGCTACAAAA
TACTACGACC AGGACGTTCA CAAAGGAGTA TTTTTAGCTA CACCTAGATA CTTAAAAGAT
TAA
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| Protein sequence | MKFDAWYTEP QTENLSLSTK LKDIIYVGQS EYQEIQVLDT YEFGRVLILE NTYQTSERDE
FIYHELISHP ALFTHGNPKK VLVIGGGDGG TVREVLKHES VEKIDFVELD GQVVEVAKKF
LPTLSCEIDN EKVNTIITDG IKYVAETSEK YDVILVDCPD PVGPAAGLFE KEFYKNLFKC
LNEDGIMVQQ TESPLLHEKL INKIKGHLKD AGFSTIRPLV CSIPTYPSGF WSFTLASKKN
DPLTSDVSEI ENKLKDMATK YYDQDVHKGV FLATPRYLKD
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