Gene MmarC6_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1077 
Symbol 
ID5738093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp1016115 
End bp1017020 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content37% 
IMG OID641283568 
Productmethanogenesis marker protein 11 
Protein accessionYP_001549123 
Protein GI159905461 
COG category[R] General function prediction only 
COG ID[COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain 
TIGRFAM ID[TIGR03280] putative methanogenesis marker protein 11 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGATT ATGTATCTTA TAAGAAAATT GTGGCAATGG TTGATGAAGA ACTTGGACTT 
ACCGAACTTG TTGAAGAACA CCCCTGTCCA AACGGTTCAG AATGGTTGAT GTACCAGTAT
CAAAGAACTT CTCCAGTAAT TGTTTCATCA TGGAGGAGTG GAAATAAGCA TCACTTTATT
TTAAAAAATG GAAAAAACGA GCTTAATCTG GTTCCTTCAA TCAGTGCAGC AGGAATTGAA
GAAGTTTACC TACAGAATGG AAACGTTCAC ATTGTTTATG CAGGCCTTGC AGGTGCAGGA
GTTGGAATCG AACTTAGAAA AAATGCTAAA AATGTATTAT GTGCTGAATT GATCGAAAAA
GGGGGTGGAT CAAAACTTGG AAGAGGAATT ATCCAGACTC CAAAAATGGA AAAAATAACC
ATCGGAATCG ATGACACCGA TACAAAAGAA GAAGGTGCAA CCTGGGTTTT AGCAAATGAG
GTTGGAAATT TAATTGAAGA ATCCAAAATG GGTTTTTACA TCGACCACAC AATAACCCAG
TTATTCCCTG GAAATCCAAA CAAAACACAA AATTGCGTTT CAATTGCACT CACTTTTGCA
GTTTACCCTG AATACCGGTA CAAAATTGGA AAGGAAATTG AAAAATTGCT AAAAGAAAAA
ACACTTTCAG AAAAAACTGC AATTGCAATT TACAGGGGAC TTACACCTTC GCAAAGCATG
AAATTGTACA CTATGAAAGC TAAGCGGGAA ATGGTTCCCA TAAATGAGGC TAAAATGGTT
GCAATGAGAA ACAACATTGA AATTATAGAA GTTACTGGTG ATGGCGGTAT AATTGGTGCT
GTGGCTGCAT TAGGGCTTGC AGAATGCCAT AAAACTGCTG CAAAATTACC CGAAACTTAT
GAATAA
 
Protein sequence
MIDYVSYKKI VAMVDEELGL TELVEEHPCP NGSEWLMYQY QRTSPVIVSS WRSGNKHHFI 
LKNGKNELNL VPSISAAGIE EVYLQNGNVH IVYAGLAGAG VGIELRKNAK NVLCAELIEK
GGGSKLGRGI IQTPKMEKIT IGIDDTDTKE EGATWVLANE VGNLIEESKM GFYIDHTITQ
LFPGNPNKTQ NCVSIALTFA VYPEYRYKIG KEIEKLLKEK TLSEKTAIAI YRGLTPSQSM
KLYTMKAKRE MVPINEAKMV AMRNNIEIIE VTGDGGIIGA VAALGLAECH KTAAKLPETY
E