Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1077 |
Symbol | |
ID | 5738093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 1016115 |
End bp | 1017020 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641283568 |
Product | methanogenesis marker protein 11 |
Protein accession | YP_001549123 |
Protein GI | 159905461 |
COG category | [R] General function prediction only |
COG ID | [COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain |
TIGRFAM ID | [TIGR03280] putative methanogenesis marker protein 11 |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGATT ATGTATCTTA TAAGAAAATT GTGGCAATGG TTGATGAAGA ACTTGGACTT ACCGAACTTG TTGAAGAACA CCCCTGTCCA AACGGTTCAG AATGGTTGAT GTACCAGTAT CAAAGAACTT CTCCAGTAAT TGTTTCATCA TGGAGGAGTG GAAATAAGCA TCACTTTATT TTAAAAAATG GAAAAAACGA GCTTAATCTG GTTCCTTCAA TCAGTGCAGC AGGAATTGAA GAAGTTTACC TACAGAATGG AAACGTTCAC ATTGTTTATG CAGGCCTTGC AGGTGCAGGA GTTGGAATCG AACTTAGAAA AAATGCTAAA AATGTATTAT GTGCTGAATT GATCGAAAAA GGGGGTGGAT CAAAACTTGG AAGAGGAATT ATCCAGACTC CAAAAATGGA AAAAATAACC ATCGGAATCG ATGACACCGA TACAAAAGAA GAAGGTGCAA CCTGGGTTTT AGCAAATGAG GTTGGAAATT TAATTGAAGA ATCCAAAATG GGTTTTTACA TCGACCACAC AATAACCCAG TTATTCCCTG GAAATCCAAA CAAAACACAA AATTGCGTTT CAATTGCACT CACTTTTGCA GTTTACCCTG AATACCGGTA CAAAATTGGA AAGGAAATTG AAAAATTGCT AAAAGAAAAA ACACTTTCAG AAAAAACTGC AATTGCAATT TACAGGGGAC TTACACCTTC GCAAAGCATG AAATTGTACA CTATGAAAGC TAAGCGGGAA ATGGTTCCCA TAAATGAGGC TAAAATGGTT GCAATGAGAA ACAACATTGA AATTATAGAA GTTACTGGTG ATGGCGGTAT AATTGGTGCT GTGGCTGCAT TAGGGCTTGC AGAATGCCAT AAAACTGCTG CAAAATTACC CGAAACTTAT GAATAA
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Protein sequence | MIDYVSYKKI VAMVDEELGL TELVEEHPCP NGSEWLMYQY QRTSPVIVSS WRSGNKHHFI LKNGKNELNL VPSISAAGIE EVYLQNGNVH IVYAGLAGAG VGIELRKNAK NVLCAELIEK GGGSKLGRGI IQTPKMEKIT IGIDDTDTKE EGATWVLANE VGNLIEESKM GFYIDHTITQ LFPGNPNKTQ NCVSIALTFA VYPEYRYKIG KEIEKLLKEK TLSEKTAIAI YRGLTPSQSM KLYTMKAKRE MVPINEAKMV AMRNNIEIIE VTGDGGIIGA VAALGLAECH KTAAKLPETY E
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