Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1075 |
Symbol | |
ID | 5738095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 1013873 |
End bp | 1015489 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641283566 |
Product | PUA domain-containing protein |
Protein accession | YP_001549121 |
Protein GI | 159905459 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain |
TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAGC CGATATTATA CGATATAGGA AGAATTTGCA AGGAGAAACA CGAATTAACT TCTTCCACGA CCACTCCAAA AATAATTGAG TTCAATATAG ACGTTCCATT ACTAAAAACG CTAAAAATTC CTTTTGATGC ACCAAAGGAA GTTGCAGAAG AGCTCGTAAA ATTAAATAAA TCAGAATATG TAAGAAAAAG TGAAATAAGC TACCAGATAA TAAATGCTGG AAAATATTCT GATTTAATCG ATATCGAAGA AAATATGGAC GTTTACGTAA TTTCCGACAT TCGACAGATA ATAAAAAGAA GGGAAATGAT CGAGATTATT CCAAACGTGA GGGAAAAAAT CTCTCCAAAT TCAGGAATAT ATGTTCCAGG TGCAATGCCT TCAGAAATTC CACTGCTCGC CTATATGGGA GCAGATTATT TTGATTATTC ATCTGCAAGC TACTATGCAG CGCAAGGGTA TAAATTTAGT AAAAATAGAC TTATAAACTC AGAAGATGAT TTTGAGTCCT TAAAAAAGTT CAATGAATCT ATAATTGATC AGGTTTTAGA TGAAGTAAAA TTCTGTATCG AATCAGGTTC ATTAAGAAAT CTCGTGGAGG AAACCACTAT TTCAAACCCA TATTTAAGGT CAAATTACAG ACGGTTTAAA CCTGAACTTA CAAATATTCC GATTTCAAAG TCAAACAAAA TAATTGTAAC GATTGACGAG ACAAAAATTC CAGAAGTTCA AAAGTACATT GAAAGGGCGA AAAATTATGA GCCATATACA AATGTGATCA TACTTTTACC ATGTTCTTCA AAAAAACCGT ATTCATATTC AAAAAGCCAC CAGTTCTTCA TAAATGCAAT TAATTCAGTA AAAATGCCAG TAGAAGAATT GATTTTGACT TCACCTTACG GAGTAGTTCC TAGAGCGCTT GAAAGGCTTG TGGATTACGA TATTCCCGTA ACTGGAGAAT GGAGTTCTGA TGAGATAGCG TTTATAAACA AATATTTGAA AAATTACATC GAAATCGCAA AATCTAAATT CGAAGAAGTA AAGATAATAG CACATCTTCC AGAACACTAT CTTGAAATTT TGGATATCGA TGAAGACTAC ATAATTTCTT CAGATGGAGA TCCAACGTCT GACAATTCGT TAAAAAATCT CAAAAACATC TTAAAAGAAT TAGATCAAAC TGCTGACACA AAATCAAAAC GCGCACAGAG ACTCCATAAT TATCAGGAAC TTGCAAAGTT TCAGCTTGGA AAGAACTTTT TGCCTGAAGA TGTAATGATA AAAGGAAGAC ACGTTAAATT CTTCATAAAA GACGGCAAAA ATACGGTTCA ACTGGCTTCA ATCAATGATA ACGGCCTTTT TGTACTTACT TCACAAGGCG GGGAACTTCT CGGTAAAACA AACTGGGTAG AAGTTGATTT TGACGTTAAA AAAGGTTCAT TATTTGCCCC AGGATTTAAA AATGCTGATG AAGCTGTTTC TGTAAACGAC GAAGTAGTTA TCATAAAATA TAATGAAGTT TTAGGGGTTG GACGGGCATT AATGAGTGGA AAAGAAATGA AAAAGGCAAC GCACGGTGTT TTGGTAAATA TAAGGCATGT TAAATAA
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Protein sequence | MLEPILYDIG RICKEKHELT SSTTTPKIIE FNIDVPLLKT LKIPFDAPKE VAEELVKLNK SEYVRKSEIS YQIINAGKYS DLIDIEENMD VYVISDIRQI IKRREMIEII PNVREKISPN SGIYVPGAMP SEIPLLAYMG ADYFDYSSAS YYAAQGYKFS KNRLINSEDD FESLKKFNES IIDQVLDEVK FCIESGSLRN LVEETTISNP YLRSNYRRFK PELTNIPISK SNKIIVTIDE TKIPEVQKYI ERAKNYEPYT NVIILLPCSS KKPYSYSKSH QFFINAINSV KMPVEELILT SPYGVVPRAL ERLVDYDIPV TGEWSSDEIA FINKYLKNYI EIAKSKFEEV KIIAHLPEHY LEILDIDEDY IISSDGDPTS DNSLKNLKNI LKELDQTADT KSKRAQRLHN YQELAKFQLG KNFLPEDVMI KGRHVKFFIK DGKNTVQLAS INDNGLFVLT SQGGELLGKT NWVEVDFDVK KGSLFAPGFK NADEAVSVND EVVIIKYNEV LGVGRALMSG KEMKKATHGV LVNIRHVK
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