| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1063 |
|---|
| Symbol | |
|---|
| ID | 5738260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 1003826 |
|---|
| End bp | 1004377 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 641283554 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001549109 |
|---|
| Protein GI | 159905447 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1628] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAATACA AAGATGAAAT CGGGGTTATT GGAATCGATG ATGCGCCATT TAATAAATCT
GACAGAGAAG CGCTGATTAT TGGAACCTAC ATGAGGGGAA ACATAATAGT CGATGAGATA
TTGTTTAAAA AAATAGAAAA GGACGGTTTT GATTCGACTG AAAAAATTTT GAAAATTGTA
AAAGATAAAC ATTTTACAAA AATAAACGCT ATTTTTTTAG ACGGGGTTAC TTTTGGCGGT
TTTAATATTG CAGATATTGT TAAAATTTAC AATGAAACAA AAATTCCGGT GATTGCGATA
ATTGAAAAAG AACCTGATCT TTTAAAGATG AAATCTGCCT TGAAAAAATA TTTTTTTGAT
TTTCCAGAAA AAATTGAAAT GTTAGAATCA TTCCCATACC CTGAACCTTT TGAAAATATA
TTCATTCAAT ATATCGGAAT AAATTTTGAA GATGCTTGCA AAATAATCAA AAAAACAAGA
CTTAGAAGTA AAATTCCAGA ATGCTTAAGA ATATCACATA TTGTTGGAAG GGGATTTTTG
AATATTGACT AA
|
|---|
| Protein sequence | MEYKDEIGVI GIDDAPFNKS DREALIIGTY MRGNIIVDEI LFKKIEKDGF DSTEKILKIV
KDKHFTKINA IFLDGVTFGG FNIADIVKIY NETKIPVIAI IEKEPDLLKM KSALKKYFFD
FPEKIEMLES FPYPEPFENI FIQYIGINFE DACKIIKKTR LRSKIPECLR ISHIVGRGFL
NID
|
|---|
| |