Gene MmarC6_1025 details

Gene Information

• Locus tag: MmarC6_1025
• ID: 5738623
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: +
• Start bp: 973265
• End bp: 973741
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641283517
• Product: XRE family transcriptional regulator
• Protein accession: YP_001549072
• Protein GI: 159905410
• COG category: [K] Transcription
• COG ID: [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1
• TIGRFAM ID: [TIGR00270] conserved hypothetical protein TIGR00270

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATGCG AACTCTGCGG AAAAGAGGTT AAGAATATCA TTAAAACAAG AGTAGAAGGC 
GTAGAAATGA ATGTTTGCGA GGCTTGTGCA AAGTTTGGCA TGTCGCCGAA AGGATATTCT 
AGAAAACCAA AGGCAGTATT CAAAACTGAA ACAAAAGAAA AACCATTTAA AAGACCTAGA 
AAAGATATGT TTGATAATTT AAAAACTCTG GTCGAAGATT ACGGCTCTCT GGTAAAAGAA 
GCAAGGGAAA AGAAAAATAT GACCTTAGAA GAACTTTCAA GAGCTGTTGG AATTAAAGAA 
TCCCTTATTC ACAAAATAGA AAGAAACGAA ATTGAACCTG AGGAAAAATA CGTAAAAATC 
CTCGAAAAAG AACTTGGAAT TTCTTTCTAC GAAGAAGGAG ATTATAACTA CGAAGCAAGC 
AATAATGAAA GTGATTTTAC ACTTGGAGAC TTCATTAAGG TTAAAAACAG AAAATAA 

 

Protein sequence

MQCELCGKEV KNIIKTRVEG VEMNVCEACA KFGMSPKGYS RKPKAVFKTE TKEKPFKRPR 
KDMFDNLKTL VEDYGSLVKE AREKKNMTLE ELSRAVGIKE SLIHKIERNE IEPEEKYVKI 
LEKELGISFY EEGDYNYEAS NNESDFTLGD FIKVKNRK