Gene MmarC6_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1021 
Symbol 
ID5738996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp968648 
End bp969430 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content34% 
IMG OID641283513 
ProductNifC-like ABC-type porter 
Protein accessionYP_001549068 
Protein GI159905406 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR01581] NifC-like ABC-type porter 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTAA TTAATTTCAA AAAAATGTCA ATTTTTCTGA CATTTTCGTT TACATTTTTA 
CTTTTTTTAT CAATAAGTTC ACTCATTCTA GTTCCGAAGT TTGAAGACGT TTTTGCAGCG
TTATTTCATC CAGAAATGAT CTATTCTCTT AAAGTATCAT TATATTCTTC ATTAATTTCA
ACAGCATTTG TTTTAGGTTT TTCAATTCCT ACTGGGTATG CGATATCAAG ATATTCGTTC
CCTGGAAAAA GCATTGTAAA AGCAATACTT GATTTACCAA TAGCGTTCCC AGAACTTGTT
TTGGGTCTTG CACTTTTACT TTTATTCGGT CAAACATTTA TTGGAGACAT TTTGGAGTTT
TTTGGAATAA AAGTAGTATT TACCAAACTA GGAATAGTTG TAGCTCAGAT CTTCACTGCA
CTTCCCTATG CAATACGGAT TGTATGTTCT ACTTTTCAGG ATATCAATCC AAGATATGAA
CTTGTTTCAA GAAGTCTCGG ATACAGTGAG TTTGAAACTT TTAAAAATGT TACCCTCCCT
ATGGCAAGAA GCGGGATTTT TGCTTCATCG ATAATCGCAT TTGCAAGATG CATGGGTACG
TTTGGAACAG TTTTGATGCT TGCCGGTGGA ACGTACATGT ACACAGAAAC GCTTCCAATA
ACTTTGTACC TAAACATGTC ATACGGAAAT CTCGGGATGG CGATTTCAAG CGGAATTGTA
CTTCTAATGA TATCATTTAT CGCGATTTTG ATATTTGAGA AATACGAAGG AGGGAAATTT
TGA
 
Protein sequence
MQLINFKKMS IFLTFSFTFL LFLSISSLIL VPKFEDVFAA LFHPEMIYSL KVSLYSSLIS 
TAFVLGFSIP TGYAISRYSF PGKSIVKAIL DLPIAFPELV LGLALLLLFG QTFIGDILEF
FGIKVVFTKL GIVVAQIFTA LPYAIRIVCS TFQDINPRYE LVSRSLGYSE FETFKNVTLP
MARSGIFASS IIAFARCMGT FGTVLMLAGG TYMYTETLPI TLYLNMSYGN LGMAISSGIV
LLMISFIAIL IFEKYEGGKF