Gene MmarC6_1005 details

Gene Information

• Locus tag: MmarC6_1005
• ID: 5738935
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: -
• Start bp: 951142
• End bp: 951807
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 641283491
• Product: flagellin
• Protein accession: YP_001549052
• Protein GI: 159905390
• COG category: [N] Cell motility
• COG ID: [COG1681] Archaeal flagellins
• TIGRFAM ID: [TIGR02537] archaeal flagellin N-terminal-like domain

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAA CAGAATTCAT GAAAAGCAAA AAAGGTGGCT CCGGAATCGG TACCTTGATT 
GTTTTCATTG CAATGGTATT AGTTGCTGCA GTAGCAGCAA GTGTTTTGAT TAACACAAGC 
GGATTTTTAC AGCAAAAAGC TGCAACTGCA GGAAAAGAAA GTACCGAACA GGTTGCAAGC 
GGAATACAAG TTATCCAGAT TATGGGTAAA GTAAATGCTG GTGCAAATGA TATCCAGTAC 
ATTACGTTAA TTATAACCCC AAATGCAGGC AGTTCCTCAA TTGATTTATC ACAGGCTACA 
TTAATGATTA CCGATGGAAC TAAAAAGGTA GTTAAAAAAT ATGCTGGGGA TTTAGATGCA 
TTTGATGAAG TAACTGGCAG TTTATTCGAT GTTACCCAAC TTTCATGGGC AAATGTTGAT 
ACAACCGCTA CAGAATTTGG TATCAAAGTA TTACAGGATG CAGACAACTC ATGTGCTGCG 
GCAACGCCTG TAATTAACAA AGGAGATGTT GTAGCAATTA CAATTGATAA TACCGGATCA 
GAAATCAGAT TAGATCAAAG AACTGAGGTT TCAGGTACTT TTGAACCAGA ATTTGGTGCT 
CCAGGAGTTA TTTCATTTAC CACACCTGCA ACATACACTG CGAGTGGTGT TGTTGGACTT 
CAATAA 

 

Protein sequence

MKITEFMKSK KGGSGIGTLI VFIAMVLVAA VAASVLINTS GFLQQKAATA GKESTEQVAS 
GIQVIQIMGK VNAGANDIQY ITLIITPNAG SSSIDLSQAT LMITDGTKKV VKKYAGDLDA 
FDEVTGSLFD VTQLSWANVD TTATEFGIKV LQDADNSCAA ATPVINKGDV VAITIDNTGS 
EIRLDQRTEV SGTFEPEFGA PGVISFTTPA TYTASGVVGL Q