| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0996 |
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| Symbol | |
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| ID | 5738524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 943573 |
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| End bp | 945249 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641283482 |
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| Product | flagellar assembly protein J |
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| Protein accession | YP_001549043 |
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| Protein GI | 159905381 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.448004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTCG ATATACTTCC AAGAGTCGGA TTAAAACCAA AAGATTACAT TCTTAAATTC
ATACTTCCTG CAAGCGTTAT TTCACTTTTA TTATTAATCT TGGGAATAAC CTACTTTTCA
GGATACACAC GATTAGTCGT ATTATTTCTG CCGCTTCTCT TAATGGGAAG TGCCATAGGT
TATCCATATA TCGAACTCGA TTCACAACGC CAAAAAATAA ATGAAAGACT ACATATATTT
ATTACAAAAT TTGGAGTTCT TTCAATTACT GATCTTGATA GAAAAGAATT AATGCATCTT
TTGGCAACCG AAAAAGAAGA ATTAGGTCAG CTTGCAACAG AATCTCATAA AATCTTTGTA
TTGATTAAAA GATGGAACCA GTCTCTTGCG GAATCCTGCA GATTCTTGGC AAACAGATCC
CCTAGCAACC AGTTTGGTGA TTTTTTAGAC CGTATGGCCT ACTCGATAGA CAGCGGTCAG
GAGTTAAAAG AATTTTTACA TGGTGAACAG GACATTGTCA TGGAAGACTA CGGTGAATTT
TATAAAAGGT CAGTTTACAC CCTTGACACG TTCAAAGAGA TGTACGTAAG CGCAGTCACT
TCTGTATCAT TTTTTGTTAC TTTTGCAATA ATTGCACCAT TTTTACTTCC ATACGACTTC
GTAACGATGG TAACTGTTGC CCTATTAGGT TTTGTGATGA TTGAAGTTAT TTTAGTCTAT
GCGATAAAAA GCAAACTTCC ATACGACCGT TTATGGCATA CAGGGGATAA ACCGACAAAA
ATCGACAAGA AATTAAAAAA ATGGTTAATA ATTTCGGTTA TCGGAACAGT TTTGCTCACA
CTATTCCTAC TATGGGGAAA ATTTATCGGA GAAATTCCCC AAATAATGAA AATACCCTAC
CAGATAATTT TCGCACTTGG AATGAGCCCC CTTGCTATCG GAGGATATTT TGCACAGCGT
GAAGAAAACA TTGTGATTAG AAAAGAATTC AATTTTCCAG ACTTTTTAAG GTCTTTGGGA
GATTCTGTCA GCGCAAAAGG TGGAGGTATG ACTGATTCGT TAGAATACCT CTCATCAAAC
GACTTTGGGC CATTAACAAA AGATTTGGAA GGACTTTACA AAAGAGTATC GATTAGGGTA
AACAGTCAGA AGGCATGGCG ATACTTTGGA TACGATACAT GCAGCTACAT GATACAGTTG
TTCTCCGAAA TGTTTGAAAG GTGTACATTT TTAGGAGGAA ATGCAGGACT TGCTGCACAC
ATGATTGGAA AAAACTTCAG AAAAATCATT AATTTGAGAA AAGCAAAATA CCAGAGTGTC
AGCCAGTTTT CCGGAATCAT GTACGGTTTA TCTGGGGGTA TGGCACTTAC ACTCTATGCT
TCAGCAGGGG TTGCAGACAT GGTTAATGGA CTATATACAA CCCTAGATAT ACCTGACACA
ATGATATCGC TTGTAAATAT CATAACACCC GAAGATTTCA GCTTGATTGC ATATTTGATA
TATGGTGTAC TCGTAATTTA TTCAATTGTT TCAGGATACC TGATAAAATT GATGGACGGT
GGCCACTATC AGGTTTCACT CATGCATTTT GTGATAATGC TCTGGATTGC GTCAATTGTA
GGATACATTA CCGAATTAAT GACTGGAAGT CTGCTTGGAA CGAGTCTCCC AATTTAA
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| Protein sequence | MFFDILPRVG LKPKDYILKF ILPASVISLL LLILGITYFS GYTRLVVLFL PLLLMGSAIG
YPYIELDSQR QKINERLHIF ITKFGVLSIT DLDRKELMHL LATEKEELGQ LATESHKIFV
LIKRWNQSLA ESCRFLANRS PSNQFGDFLD RMAYSIDSGQ ELKEFLHGEQ DIVMEDYGEF
YKRSVYTLDT FKEMYVSAVT SVSFFVTFAI IAPFLLPYDF VTMVTVALLG FVMIEVILVY
AIKSKLPYDR LWHTGDKPTK IDKKLKKWLI ISVIGTVLLT LFLLWGKFIG EIPQIMKIPY
QIIFALGMSP LAIGGYFAQR EENIVIRKEF NFPDFLRSLG DSVSAKGGGM TDSLEYLSSN
DFGPLTKDLE GLYKRVSIRV NSQKAWRYFG YDTCSYMIQL FSEMFERCTF LGGNAGLAAH
MIGKNFRKII NLRKAKYQSV SQFSGIMYGL SGGMALTLYA SAGVADMVNG LYTTLDIPDT
MISLVNIITP EDFSLIAYLI YGVLVIYSIV SGYLIKLMDG GHYQVSLMHF VIMLWIASIV
GYITELMTGS LLGTSLPI
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