Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0990 |
Symbol | |
ID | 5738514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 936771 |
End bp | 938174 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641283476 |
Product | phosphoesterase domain-containing protein |
Protein accession | YP_001549037 |
Protein GI | 159905375 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.267504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATATT TAATTAATTT AAAAAAAGCA GTTAAATTAC TTAGAAAAAA TCGGGACAAA AGAATACTAG TTTGTACTCA CATCGATACT GACGGTATAA ATTCCAGAAT TATTTTAGAA AAAGTGCTCG AAAGATTGAA TATCGAAGCG GAATTTCTAT TTTTAAGGCA GATTGACTAC GGGACAATCG ATACAATTCC ATTTGATAGT GATTTAATAA TATTTGCAGA CCTTGGGAGC GGCCAGATTG ATTTAATAAA CGAAAAGTTA GAAGAACTCT CAAAAAAGCC AAAAATAATT ATTTTAGACC ACCACTTTAT CTCAAATGAA AGAATCCCCG AAAATATTGT AAATGTAAAC CCTCACAACA ATGGAATTGA CGGTGGAAAA GAAATTTGTG GTGCAGGAGT TTGCTATCTT TTTGCAAAAA TATGCGATCC TCGTTTTACC GATCTTGCAA AATATGCAGT TTTAGGGGCT GTTGGAGACG TTCAGAGTCT TGAAGGAAAT TTGATTGGAT TAAATCGAGA TGTAATTTTA AAAGATGCAA TTAATGCCGG AGATATTTCA GTAAGTCCAG ATTTACAGTT TTACGGGAAG CATACGAGGC CGCTTTTTAC TTCGATTAAA TATTTTACGG ACGTTAGGAC GGATCTTACT GATAACGATT CTCGAATAAT TAACTTTATA AACAATGTAA ACAGAAAGCA CGGAACCGAC ATAATTCCAA AAGATTACAT GTGTGACCTC ACATTTGAAC AGAAAAAAAT CCTGGGAAGT GAGTTTTTAC ACAAATGCAG TCGATACATT CCTCCAGACT GGAGAATACA CCTTCCAAAG GTTATATTTG GGGAGAGTTA CGAGCTAGTA AATGAAGAAT TTAAATCAAA TCTAAAGAAT CTGGAAGAAT TTTCAACCTG TATAAACGGA TGTTCGAGAT ACGATGAATA TGAAGTTCCT CTCGAAGTTT TAAAAGGAGA TCGGGATAAA AACTACAGTA AAATGCTTAG AATGCTCAAA AAACACAAAA GAAATCTAGC AGGTTCGATG GATTTTTTAA GAAACGAAGT TGAAATAGTT CAAAAAGAAA ACTTCCAGTA CTTTGAAGTA GATAAAAATG CAATAAACGG AAACATTGTT GGAATTGTTG CAGGAATGAG CTATTCTCTT GAAAAGGTCG ACTGGAAAAA GCCAATTTTT GCAGTTTCTG AAGTAGATAA TGGATACAAG GTTTCAGCAA GATGTCCAAA GTTGTTATCG TTTGCACAGG ATATAAATCT TGCAACTGCG ATAAACTACG CTTCTAAAAA GGTTGGTGGA AGTGGTGGTG GACACAAATT CGCTTGTGGA GCATATATCC CAGAAATTGG AGATTTTGTT AGCTATCTCG AAGAAAAATT ATAA
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Protein sequence | MEYLINLKKA VKLLRKNRDK RILVCTHIDT DGINSRIILE KVLERLNIEA EFLFLRQIDY GTIDTIPFDS DLIIFADLGS GQIDLINEKL EELSKKPKII ILDHHFISNE RIPENIVNVN PHNNGIDGGK EICGAGVCYL FAKICDPRFT DLAKYAVLGA VGDVQSLEGN LIGLNRDVIL KDAINAGDIS VSPDLQFYGK HTRPLFTSIK YFTDVRTDLT DNDSRIINFI NNVNRKHGTD IIPKDYMCDL TFEQKKILGS EFLHKCSRYI PPDWRIHLPK VIFGESYELV NEEFKSNLKN LEEFSTCING CSRYDEYEVP LEVLKGDRDK NYSKMLRMLK KHKRNLAGSM DFLRNEVEIV QKENFQYFEV DKNAINGNIV GIVAGMSYSL EKVDWKKPIF AVSEVDNGYK VSARCPKLLS FAQDINLATA INYASKKVGG SGGGHKFACG AYIPEIGDFV SYLEEKL
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