| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0941 |
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| Symbol | |
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| ID | 5738679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 881931 |
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| End bp | 883685 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641283421 |
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| Product | DNA polymerase II small subunit |
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| Protein accession | YP_001548988 |
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| Protein GI | 159905326 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAACG ACTTTTTAAA CATTCAGGTA CTTTTAGCCC CTGATTCCTA CTCAAGAATC
CAAAATCTTG ACACCGAAGA TTTTTCAGAT TTATTCGATA AGATAAAAGA ATTTAAAAGT
AAAAAGGACG ATTTTATACT CCTCGATTCG CATTTTTTAA ACATTTTTTT GGGAAATAAT
TTAAAAAATA TTTTTGAAGA CTACGGAAAA TTCGATTTTT TAGCATACTA CACGTCAAAC
GAAGTGACAT CAGAAAATCA GGAAATTATC GAACAAACAG ATGATTTTGA ACCTGTTGAA
CCGGAAGTTT TGATGGAAAA AGAAATTAAA AAAGAAACTA AAGTTTACGA TCTCGATTTT
GAAGATGTTG AGGAAGAAGT ACCTGAACTC GATGAGGTAC ATAAAAAATT GGAAGAAGAG
CGAAAAGAAA GGCTTTTAGA AATAAGATCT ATTCGAGAAA GTGTTAATAA CAAAATAAAC
TACTACGCAA AAGATATCGA AGCACAAATA CACGTTTATG ATGAATACGA CGTTACCGGA
AAATCTACCT GTGAAGGAAC ACTCGATGAC TTTGTGAAGT ATTTTAAGGA TAGATGCAGT
ACTTTAAGAA AAATAATTGA ATTAAAAGTT CAGAAGAAAG CCTACCCACT AAACCAGCTT
TTCAGGAGAA AAAAAGAAAA TGAAGTTTTC ATCGCAGGAA TTGTATCAGA TGTGAATTCC
ACCAAAAATG GACACAAAAT GATTGAATTG GAAGATGAAA ATGGAACGTT CAGACTTCTT
TTGATGAAAG ACAAAATGGA CAAGGGGGAT CTTCCATCAG ACGTTCTTTT AGATGAAGTT
ATCGGTTTTG AAGGAACTAT TAATGATAAA GGAGACTTAA TGTTTGTAGA TCGGGCTTTT
AGACCGGATA TTACTCCAAA ACCTACAAAA ACGACAGACG AAAAGATATA CACTGCATTT
TTGTCAGACG TTCACGTTGG AAGCCACGAG TTTTCAAACA AAGTATTTGC AAAATTTATT
AAATTCTTAA ACGGGGATGT AAATAGCGGT TTAGAAGAAA AAATAGTAAG CAGGTTGAAA
TATATTTCAA TTGCAGGAGA TCTGGTGGAT GGAGTTGGAA TTTATCCTGG TCAAGAGTAC
GATCTTTATG ATGTGGATAT AATTTCACAG TATGCAGAAG TTGCAGCTTA TTTAGAGCAG
GTTCCAGAAC ATATAAAATT CATAATTTCT CCGGGAAACC ACGATGCGTT AAGACCTGCG
GAACCGCAGC CTACATTTGA TGAATCGATA ACAAGCCTGT TTCCAAAAGA AAATGTAACT
TTTGTTGGAA ACCCCGGTGT AGTAAACATG CACGGCCTTG ATTTATTATT ATATCACGGT
AGAAGTTTTG ATGATATTAT CGGACAGGTT TCAGTAGCAC AATATACAAA TCCTCCATCA
ATTATGAAAG AACTTTTAAA AAGAAGACAT TTATGTCCAA CATACGGTGG ACGATGCCCG
ATAGCTCCGG AACACATCGA TTACCTTGCA ATACACACAG AACCGGATAT TTTCCACACC
GGACATATTC ATATCAACGG CTATGGTAAT TATCACGGAG TTAGGATGAT AAACAGCGGT
ACGTTCCAGG AACAAACCGA TTTCCAAAAG AGAATGGGTA TCAAGCCTAC GCCGGGAATT
GTTCCGATAC AGGATTTGTC TAAAAAAGAA ACTCACGTAA TTGAGTGGAA TCAGGGAAAA
ATCGAAATAA GTTAA
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| Protein sequence | MINDFLNIQV LLAPDSYSRI QNLDTEDFSD LFDKIKEFKS KKDDFILLDS HFLNIFLGNN
LKNIFEDYGK FDFLAYYTSN EVTSENQEII EQTDDFEPVE PEVLMEKEIK KETKVYDLDF
EDVEEEVPEL DEVHKKLEEE RKERLLEIRS IRESVNNKIN YYAKDIEAQI HVYDEYDVTG
KSTCEGTLDD FVKYFKDRCS TLRKIIELKV QKKAYPLNQL FRRKKENEVF IAGIVSDVNS
TKNGHKMIEL EDENGTFRLL LMKDKMDKGD LPSDVLLDEV IGFEGTINDK GDLMFVDRAF
RPDITPKPTK TTDEKIYTAF LSDVHVGSHE FSNKVFAKFI KFLNGDVNSG LEEKIVSRLK
YISIAGDLVD GVGIYPGQEY DLYDVDIISQ YAEVAAYLEQ VPEHIKFIIS PGNHDALRPA
EPQPTFDESI TSLFPKENVT FVGNPGVVNM HGLDLLLYHG RSFDDIIGQV SVAQYTNPPS
IMKELLKRRH LCPTYGGRCP IAPEHIDYLA IHTEPDIFHT GHIHINGYGN YHGVRMINSG
TFQEQTDFQK RMGIKPTPGI VPIQDLSKKE THVIEWNQGK IEIS
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