| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0923 |
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| Symbol | |
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| ID | 5738641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 864676 |
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| End bp | 868071 |
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| Gene Length | 3396 bp |
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| Protein Length | 1131 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641283403 |
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| Product | DNA polymerase II large subunit |
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| Protein accession | YP_001548970 |
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| Protein GI | 159905308 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1933] Archaeal DNA polymerase II, large subunit |
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| TIGRFAM ID | [TIGR00354] DNA polymerase, archaeal type II, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCATG TTTCAGCTTC AAAAGGAATG GCAGAATATT TCAAAAATAT TTTAGATAAT
GTAACCGAAC TCTACACACT TGCAGATGAT TGCAGGAAAA GCGGATATGA TGTAACAGAC
CACGTTGAAA TACCTCTGGC AAAAGATATG GCAGATAGGG TAGAAGGAAT TGTCGGTCCA
AAAAATGTTG CAGAACGTAT TCGGGAACTT GTATCTGACT TAGGAAAAGA ACCTGCAGCA
CTTGAAATTG CAAAAGAGAT AGTTGAAGGA AAGTTTGGTG AGTTCGGGCG AGAAGTTGGA
GCAGAACAAG CCGTAAGAAC AGCATTAGCA GTTATCACGG AAGGAATCGT GGCAGCACCT
CTAGAAGGAA TTGCACATGT TAAAATTAAG AAAAACAACG ATGGCAGTGA ATACCTTGCA
ATCTATTTTG CAGGACCAAT TCGGAGTGCA GGGGGAACTG CTCAGGCACT TGCAGTACTT
GTTGGGGATT ACGTTAGAAA AAACATGGGA TTGGATAAAT TTAAACCTAC AGAAGATGAA
GTTGAAAGAT ACGGCGAAGA AGTGGATTTG TACCAGTCTG AAGTTACTAC CTTCCAATAC
CAGCCAAAAG CTGAAGAAAT CAGGGTGGCG GTTAGAAACA TATCTGTAGA AATTACTGGA
GAAGCAACAG ACGACGTTGA AGTTAGCGGA CACCGGGATT TACCAAGAGT AGAAACAAAC
CAGATTAGGG GCGGGGCTCT CTTAGCGCTT GTTGAAGGTG TTCTTTTAAA GGCACCTAAA
ATTTTAAGAC ACGTTGATAA ATTGGGTATC GAAGGATGGG ATTGGCTAAA AGAGTTAAAA
AGCAAAAAAG AAGAAGTAAT CGAAGAAATT GAAGAAGAAA AAGACGATTT TAACTACGAA
GAGGAAGAAG ACTTATCACA ATACGAAGAC TACGAGGTAG AGGCAGTAAC CAAATTTATT
GGTGAAGTTA TTGCAGGAAG GCCTGTATTT TCACACCCTT CCAAAAAAGG GGGATTCAGA
CTCAGGTATG GAAGAAGCAG AAACACTGGG TTTGCAACAG ATGGTTTTCA CCCAGCAATA
ATGTATCTAG TTGATGACTT CATGGCAGTA GGAACACAGT TAAAAACTGA AAGACCTGGA
AAAGCAACCT GTGTAGTTCC TGTTGACAGT ATCGAAGGTC CAATCGTTAA ATTAAATGAT
AAAAGTGTAC TTAAAATTGA TACTGTTGAA AAAGCAAAAC AATATCGGGA TGATGTTGAA
GAAATTCTTT TTTTAGGAGA TATTTTAGTA AATTATGGGG ATTTCTTGGA AAATAACCAC
ACCATACTTC CAAGCAGCTG GTGTGTTGAA TGGTATGAAA AAATCTTAAA ATCTGAAAAT
TTAGAATATA CGAAAGAATT TATAGAAAAT CCAGACCAAA AAGAAGCAGT AACTTATGCG
AAACTTACAA AAACACCCTT ACATCCGAAA TACACGTATT TCTGGCACGA TATTTCTAAA
GATAATATCA ATGTTCTTAG AAACTGGCTC ATTGGTGGAA AATATAATGA AAACAACGAT
TCGTGGGAAT TAACTTATAA TTTAGAAGAT TCAGAAATTG CAACTTCGAA GAGGTATTTG
GAACTTATCG GATGTCCGCA CACAGTAACT GCTGAAACAG TAGAAATTTT TGAGTATTAT
CCATTATTAT ATTCATTAGG TTATGATTTT GATAAAAAAC AGGATATTGT GGAAGATATT
GGAGAAAAAC TTCAGAATAC GAAAAATAAC ATGCACTTTA TAAATACGAT AGCACCATTT
GAAATTCGAA GAAACGCCTA CATCTATGTT GGTGCAAGGA TGGGTAGACC AGAAAAGGCA
GCTTCCAGAA AGATGAAACC CCCTGTAAAT GGGCTTTTCC CAATTGGAAA TGCCGGGGCG
CTTGTAAGGC TCATAAACAA AGCTGTTGAA GAAGGAAAAA CTGACGAAAT CGAAATTTCA
AATGTAAAAT GTAGCTGTGG AAATGTAAGT TTGTATAGGA CATGTCCATT CTGCGGAAGT
TCTGTCGAAC CAAGCGGGCC TTCTCGAATA AAACTTCCAA TAAAAGAATA CTGGTACAAA
GCGCTTGAGA ACTTGAAGAT AAATAAAGCT GGCGATGTAA AATGTATCAA AGGTATGACT
TCAAAGGATA AAATAATTGA ACCCTTAGAA AAAGCGATAT TGAGGGCAAA AAACGATATA
TTTGTATTTA AAGACGGCAC TACTAGGTTT GACTGTACTG ATGTTCCAGT AACGCATTTC
AGGCCTGTAG AAATACATGT CGGTATTGAA AAATTGAAAT TTCTTGGATA TTTAAAAGAT
ATTCATGGAA ATCCGCTTGA AAATGAAAAT CAGGTACTCG AATTAAAAGT TCAGGATGTT
ATAGTCCCTG AATCTTGCAT GGATTATTTC TTCAATGTTT CAAAATTTAT AGATGACCTC
TTGGAAAAAT ACTACAAAAA AGATAGATTT TACAACGTGA ATAAAAGAGA AGAGCTTGTA
GGTCACTTAA TAATTGGAAT GGCACCACAC ACGTCTGCAG GAATGGTCGG AAGGATTATT
GGATATAGCT ATGCAAATGT AGGCTATGCA CACCCGTATT TCCACGCTTC AAAAAGAAGA
AACTGCGATG GGGATGAAGA TGCATTTTTC CTACTTTTAG ATGCATTCAT GAATTTTTCA
AAGAGATTTT TACCGGACAA AAGAGGGGGC CAGATGGATG CACCTCTGGT TCTTACAACA
ATTCTGGATC CTAAGGAAGT GGATGGTGAG GTTCACAACA TGGATTCGAT GTGGGAATAT
CCTCTCGAAT TCTATGAAAA ATCCCTTGAA GGAATTGCTC CAAAAGAAAT CAAAAAAATA
ATGCAAACCG TTGAAGACAG GCTTGATAAA GACAGTCAGT ACGAAGGAAT TGGATACACT
CACGAAACTT TGAAGATTGA TGAAGGACCC CTAGTTTGTG CTTACAAAAC ATTGGGTTCC
ATGATGGAAA AGACCTCAGC TCAACTTGCG GTTGCAAAAA AGATTAGGGC AACTGATGAA
AGGGATGTAG CAGAAAAGGT TATACAATCA CACTTTGTAC CTGATTTAAT TGGAAATTTA
AGGGCTTTTT CAAGACAGGG TGTAAGGTGC AAATGCGGTG CAAAATACAG AAGAATGCCT
TTAAAAGGGG TTTGTAGAAA ATGCGGAAGC AGATTGATTT TGACAGTTTC AAAAGGGGCT
GTTGAAAAGT ACATGGACGT TTCACAAACA ATGGCTGAAA AGTACAATGC AAGCGACTAC
ATAAAACAAA GACTCGAAAT TATACGGTCC GGAATTGACA GTTTGTTTGT AAATGACAAG
AGAAAGCAGG TTAAAATTGA AGATTTCTTT AAATGA
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| Protein sequence | MLHVSASKGM AEYFKNILDN VTELYTLADD CRKSGYDVTD HVEIPLAKDM ADRVEGIVGP
KNVAERIREL VSDLGKEPAA LEIAKEIVEG KFGEFGREVG AEQAVRTALA VITEGIVAAP
LEGIAHVKIK KNNDGSEYLA IYFAGPIRSA GGTAQALAVL VGDYVRKNMG LDKFKPTEDE
VERYGEEVDL YQSEVTTFQY QPKAEEIRVA VRNISVEITG EATDDVEVSG HRDLPRVETN
QIRGGALLAL VEGVLLKAPK ILRHVDKLGI EGWDWLKELK SKKEEVIEEI EEEKDDFNYE
EEEDLSQYED YEVEAVTKFI GEVIAGRPVF SHPSKKGGFR LRYGRSRNTG FATDGFHPAI
MYLVDDFMAV GTQLKTERPG KATCVVPVDS IEGPIVKLND KSVLKIDTVE KAKQYRDDVE
EILFLGDILV NYGDFLENNH TILPSSWCVE WYEKILKSEN LEYTKEFIEN PDQKEAVTYA
KLTKTPLHPK YTYFWHDISK DNINVLRNWL IGGKYNENND SWELTYNLED SEIATSKRYL
ELIGCPHTVT AETVEIFEYY PLLYSLGYDF DKKQDIVEDI GEKLQNTKNN MHFINTIAPF
EIRRNAYIYV GARMGRPEKA ASRKMKPPVN GLFPIGNAGA LVRLINKAVE EGKTDEIEIS
NVKCSCGNVS LYRTCPFCGS SVEPSGPSRI KLPIKEYWYK ALENLKINKA GDVKCIKGMT
SKDKIIEPLE KAILRAKNDI FVFKDGTTRF DCTDVPVTHF RPVEIHVGIE KLKFLGYLKD
IHGNPLENEN QVLELKVQDV IVPESCMDYF FNVSKFIDDL LEKYYKKDRF YNVNKREELV
GHLIIGMAPH TSAGMVGRII GYSYANVGYA HPYFHASKRR NCDGDEDAFF LLLDAFMNFS
KRFLPDKRGG QMDAPLVLTT ILDPKEVDGE VHNMDSMWEY PLEFYEKSLE GIAPKEIKKI
MQTVEDRLDK DSQYEGIGYT HETLKIDEGP LVCAYKTLGS MMEKTSAQLA VAKKIRATDE
RDVAEKVIQS HFVPDLIGNL RAFSRQGVRC KCGAKYRRMP LKGVCRKCGS RLILTVSKGA
VEKYMDVSQT MAEKYNASDY IKQRLEIIRS GIDSLFVNDK RKQVKIEDFF K
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