Gene MmarC6_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_0909 
Symbol 
ID5738567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp842607 
End bp844253 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content36% 
IMG OID641283384 
Producttype II secretion system protein E 
Protein accessionYP_001548956 
Protein GI159905294 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCTTT TTGACAGAAT TCAAACTAAA GATTCCAGAC CCGCTATCGC TAAAAAGAAT 
GTTGTATCTG AGGTATCTGA AACCCCAAAT ATACTTGATA AATCTGAAAA AGAAAAACAG
GATGTTAAAG TTGGATTTTC AGTAAATACT CGAGTAAAAA AACAGCCTGT CGAAGAATTT
AATAGGGAAT CCACAGGATC GATAATCGAT AAATATTTTG TAAAAGTTGA TGATATCGAT
TTTGATGTAA TTATCGAAAA GGAAGAAGGA GTTACAAAAT ATAAAATCCC AGAAATTACT
CTTATGAATA CCGCTCTTGC AAAACTTTCA GAATTGGATA TTAAAACAAT AAAATCTGAA
CTCTCGGAAT CAACCCTTCA AAAATTAGGG CAAATTCAAG GATACCTTAA AAATTATTCG
GATAAGAATA ATATACATTT AAGAGACATT GAAATACTTC ACTTATCACA TTATTTTTAT
TTGATAATCG GAAAGTTGGG ACTTTTAGAA ATCCCGCTAA ATGATAATAA TTTGGAAGAA
GTAATGGTAA ATGGAGTTGA ATTACCATTA TTCGTATTTC ACAGAAAATA CCAGATGTGC
GAATCTAATA TTCGACTCGA TAGGCACGAA ACAACAAGAA TAGTCGAAAG TATTGCATAT
CTTGCAGGAA GAAGCATCGA TTCGAGAACT CCAATGCTTG ATGCATTTTT ACCAGATGGA
AGCAGGGTCA ACGCTACAAT GGGGGACGTT ACATTAAGAG GAAACACAAT TACAATTCGT
AAATTTTCTG AAGATCCTCT AACTATTGTT GATTTAATTA ATTTTGGAAC TTTTGATTTA
GAGCTTGCTG CATTTCTCTG GCAGGCTGTC GAAGGGTACT TTGGTGCAAA ACCTGCAAAC
ACACTGATTG TAGGGGGAAC GGGTTCGGGT AAAACCACGA CTTTAAACGT GGTTTCGATG
TTCTCGATGT ATACTGATAG AATTGTAACT ATCGAAGATA CTCCCGAGTT ACAGATTCCA
CTAACACACC TGATAAAAAT GATTACAAGA CCTGGAAGAC CGGGTGTTCA GGGTTATGAA
ATTACGATGG ATGATTTAAT CAAGAACTCC CTAAGGATGA GACCAGATAG GATTTTTGTA
GGGGAAGTTA GGGGTAGTGA GGCTCACTCA TTACTTGTTG CAATGAATAC TGGGCACGAC
GGATGTTCCG GAACCCTGCA CGCAAACAGC GCTGATGAAG CGATTATCAG GTTAGTAAAT
CCTCCAATGA ACGTTCCAAA AGTTATGATG TCGTCAATTG ATTTTATCAT AAACCAGCAG
CGTATCAAAC GTAATAAAAA AACAGTTCGA AGGATCCTCG GTGTTGTCGA AATTGGGGGA
AGTGGGGAGA ATATTACAAA AACTGAACTC TTTAAATATG ATGGAATAAG CGACAGTGTT
GTAAAAACAG GAATTTGTAT GTGGGAGGAA GATGCCTGTC AGATTGCAGG TATTACCCGG
GATGAATTGA TGGATGACAG GATTAACAGA AAGAAAGTAC TAAAATACAT GGTGAATAAT
AATATTAGTG ATATTAGAAA AGTGGGCGAC ATAATTAAAC AATATCAAGA AAATCCAGAA
AATGTTTTAA AACATATATT GGAATGA
 
Protein sequence
MGLFDRIQTK DSRPAIAKKN VVSEVSETPN ILDKSEKEKQ DVKVGFSVNT RVKKQPVEEF 
NRESTGSIID KYFVKVDDID FDVIIEKEEG VTKYKIPEIT LMNTALAKLS ELDIKTIKSE
LSESTLQKLG QIQGYLKNYS DKNNIHLRDI EILHLSHYFY LIIGKLGLLE IPLNDNNLEE
VMVNGVELPL FVFHRKYQMC ESNIRLDRHE TTRIVESIAY LAGRSIDSRT PMLDAFLPDG
SRVNATMGDV TLRGNTITIR KFSEDPLTIV DLINFGTFDL ELAAFLWQAV EGYFGAKPAN
TLIVGGTGSG KTTTLNVVSM FSMYTDRIVT IEDTPELQIP LTHLIKMITR PGRPGVQGYE
ITMDDLIKNS LRMRPDRIFV GEVRGSEAHS LLVAMNTGHD GCSGTLHANS ADEAIIRLVN
PPMNVPKVMM SSIDFIINQQ RIKRNKKTVR RILGVVEIGG SGENITKTEL FKYDGISDSV
VKTGICMWEE DACQIAGITR DELMDDRINR KKVLKYMVNN NISDIRKVGD IIKQYQENPE
NVLKHILE