Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0909 |
Symbol | |
ID | 5738567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 842607 |
End bp | 844253 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641283384 |
Product | type II secretion system protein E |
Protein accession | YP_001548956 |
Protein GI | 159905294 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGGCTTT TTGACAGAAT TCAAACTAAA GATTCCAGAC CCGCTATCGC TAAAAAGAAT GTTGTATCTG AGGTATCTGA AACCCCAAAT ATACTTGATA AATCTGAAAA AGAAAAACAG GATGTTAAAG TTGGATTTTC AGTAAATACT CGAGTAAAAA AACAGCCTGT CGAAGAATTT AATAGGGAAT CCACAGGATC GATAATCGAT AAATATTTTG TAAAAGTTGA TGATATCGAT TTTGATGTAA TTATCGAAAA GGAAGAAGGA GTTACAAAAT ATAAAATCCC AGAAATTACT CTTATGAATA CCGCTCTTGC AAAACTTTCA GAATTGGATA TTAAAACAAT AAAATCTGAA CTCTCGGAAT CAACCCTTCA AAAATTAGGG CAAATTCAAG GATACCTTAA AAATTATTCG GATAAGAATA ATATACATTT AAGAGACATT GAAATACTTC ACTTATCACA TTATTTTTAT TTGATAATCG GAAAGTTGGG ACTTTTAGAA ATCCCGCTAA ATGATAATAA TTTGGAAGAA GTAATGGTAA ATGGAGTTGA ATTACCATTA TTCGTATTTC ACAGAAAATA CCAGATGTGC GAATCTAATA TTCGACTCGA TAGGCACGAA ACAACAAGAA TAGTCGAAAG TATTGCATAT CTTGCAGGAA GAAGCATCGA TTCGAGAACT CCAATGCTTG ATGCATTTTT ACCAGATGGA AGCAGGGTCA ACGCTACAAT GGGGGACGTT ACATTAAGAG GAAACACAAT TACAATTCGT AAATTTTCTG AAGATCCTCT AACTATTGTT GATTTAATTA ATTTTGGAAC TTTTGATTTA GAGCTTGCTG CATTTCTCTG GCAGGCTGTC GAAGGGTACT TTGGTGCAAA ACCTGCAAAC ACACTGATTG TAGGGGGAAC GGGTTCGGGT AAAACCACGA CTTTAAACGT GGTTTCGATG TTCTCGATGT ATACTGATAG AATTGTAACT ATCGAAGATA CTCCCGAGTT ACAGATTCCA CTAACACACC TGATAAAAAT GATTACAAGA CCTGGAAGAC CGGGTGTTCA GGGTTATGAA ATTACGATGG ATGATTTAAT CAAGAACTCC CTAAGGATGA GACCAGATAG GATTTTTGTA GGGGAAGTTA GGGGTAGTGA GGCTCACTCA TTACTTGTTG CAATGAATAC TGGGCACGAC GGATGTTCCG GAACCCTGCA CGCAAACAGC GCTGATGAAG CGATTATCAG GTTAGTAAAT CCTCCAATGA ACGTTCCAAA AGTTATGATG TCGTCAATTG ATTTTATCAT AAACCAGCAG CGTATCAAAC GTAATAAAAA AACAGTTCGA AGGATCCTCG GTGTTGTCGA AATTGGGGGA AGTGGGGAGA ATATTACAAA AACTGAACTC TTTAAATATG ATGGAATAAG CGACAGTGTT GTAAAAACAG GAATTTGTAT GTGGGAGGAA GATGCCTGTC AGATTGCAGG TATTACCCGG GATGAATTGA TGGATGACAG GATTAACAGA AAGAAAGTAC TAAAATACAT GGTGAATAAT AATATTAGTG ATATTAGAAA AGTGGGCGAC ATAATTAAAC AATATCAAGA AAATCCAGAA AATGTTTTAA AACATATATT GGAATGA
|
Protein sequence | MGLFDRIQTK DSRPAIAKKN VVSEVSETPN ILDKSEKEKQ DVKVGFSVNT RVKKQPVEEF NRESTGSIID KYFVKVDDID FDVIIEKEEG VTKYKIPEIT LMNTALAKLS ELDIKTIKSE LSESTLQKLG QIQGYLKNYS DKNNIHLRDI EILHLSHYFY LIIGKLGLLE IPLNDNNLEE VMVNGVELPL FVFHRKYQMC ESNIRLDRHE TTRIVESIAY LAGRSIDSRT PMLDAFLPDG SRVNATMGDV TLRGNTITIR KFSEDPLTIV DLINFGTFDL ELAAFLWQAV EGYFGAKPAN TLIVGGTGSG KTTTLNVVSM FSMYTDRIVT IEDTPELQIP LTHLIKMITR PGRPGVQGYE ITMDDLIKNS LRMRPDRIFV GEVRGSEAHS LLVAMNTGHD GCSGTLHANS ADEAIIRLVN PPMNVPKVMM SSIDFIINQQ RIKRNKKTVR RILGVVEIGG SGENITKTEL FKYDGISDSV VKTGICMWEE DACQIAGITR DELMDDRINR KKVLKYMVNN NISDIRKVGD IIKQYQENPE NVLKHILE
|
| |