Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0885 |
Symbol | |
ID | 5738200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 824049 |
End bp | 825275 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641283360 |
Product | ammonium transporter |
Protein accession | YP_001548932 |
Protein GI | 159905270 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.373792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACAG CAGATTTATT TGCCGACCCA ACAAACATCG TAACAGGACT CAGTACATTG GCAACTTCCG GAGATGTAAT GTTTTTAGTA TTGATGGGAA CACTCGTGTT TGCAATGCAG TTAGGATTTG CACTTCTTGA AGGCGGTCAG GTCAGAAAGA AAAATGTTAA CAACGTAATG ATGAAAAACA TGGCAGACTG GTTAATCGGG GCAGTTTCAT GGCTCTTTAT AGGCTCAGTT CTTGCGGTAT CACTTGTTCC TGGAGACTTT TTCAGCTGGT GGGGACAGAT ATTCACAACA AACTTTGCAG ACAACGGAAT AGGTTTAGCA AACTGGTTCT TTGGACTGGT ATTCGCAGCA ACTGCCGCTA CAATCGTATC CGGTGGTGTT GCAGAAAGGA TTAAATTCAA ATCATATTTA TTAATGTCAA TAGTAATAAC TGCAGTGCTT TACCCATTGT TTGTGTACCT CGGACCATGG GGTTCAGGAA TGATTCCATT CAACGATTAC GCTGGAAGTT TCATCGTACA CGGTCTCGGT GGTTTCTTAG CACTTGGAGC AATCATGGCT CTTGGACCAA GGATTGGAAA ATTCGTTAAC AAAAAACCAA TTTCAATTCC GGGACACAAC ATTCCAATGT CAGTATTCGG GGCATTCGTG CTTGCAATCG GATGGTACGG ATTTAACGTA GGAAGTTCAC TTGCGTTAGG AGATATTTCA GGATTAGTAT GTGCAACAAC AACGCTTGCA ATGGCAGGTG GAGGTATTGG GGCACTTCTC GCTTCAAAAG ATGATGTATT ATTCACAGCA AACGGTCTTG TTGCAGGTTT AGTTGCAATC TGTTCAGGAA CGGATGTTGT AAGCCCCGTA GGGGCATTAG TAATCGGTCT TCTTGCAGGA ATTCAGGTAC CAATCGTCTA CAAAGTCGTT GAAAAAATGG GACTTGATGA CGTATGTGGT GTAGTTCCAG TACACGGTAC AGCAGGTCTT TTAGGGGGTA TTTTAACAGG TATCTTTGGA ATGGCAGCTT TAGGTGGTGC TGGTGGAGTA AGTTTGGTAA ACCAGCTTAT TGCAGCAGGA TTAACGGTAG TATACGGTAC AGGATTAGGA TTCGGACTTG GAAAATTAGT TGGCGGATTT ACTGGCGGAC TCAGAGTTAC TGAAGAAGAA GAAAAAATTG GTCTCGACAT TGCAGAACAC AAATTGCCAG CTTACCATGA CGAATAA
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Protein sequence | MATADLFADP TNIVTGLSTL ATSGDVMFLV LMGTLVFAMQ LGFALLEGGQ VRKKNVNNVM MKNMADWLIG AVSWLFIGSV LAVSLVPGDF FSWWGQIFTT NFADNGIGLA NWFFGLVFAA TAATIVSGGV AERIKFKSYL LMSIVITAVL YPLFVYLGPW GSGMIPFNDY AGSFIVHGLG GFLALGAIMA LGPRIGKFVN KKPISIPGHN IPMSVFGAFV LAIGWYGFNV GSSLALGDIS GLVCATTTLA MAGGGIGALL ASKDDVLFTA NGLVAGLVAI CSGTDVVSPV GALVIGLLAG IQVPIVYKVV EKMGLDDVCG VVPVHGTAGL LGGILTGIFG MAALGGAGGV SLVNQLIAAG LTVVYGTGLG FGLGKLVGGF TGGLRVTEEE EKIGLDIAEH KLPAYHDE
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