Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0878 |
Symbol | |
ID | 5738746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 818437 |
End bp | 819375 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641283353 |
Product | glutamate synthase alpha subunit |
Protein accession | YP_001548925 |
Protein GI | 159905263 |
COG category | [C] Energy production and conversion |
COG ID | [COG2218] Formylmethanofuran dehydrogenase subunit C |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.225814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCTTTG GAATATTTAA AAAGAAGAAA AAAACCGTTG AAGATTATTT AACTGATAAA AATGTCCTGG AACTTATATT AGATGATCCT AAAGACTGCG TACTTGATTT TACGTATAAT TTTATATGGC AAAGTAATTT TGATATTAAA AGTGAGGTAC AGAAGGGAAT ATCTTACGAA AAATTGGTAA ACCATATAAA AAACCCTGAA AATGTAGTTT ATATTAAAGG GGATATGGGC CACAGGTTTT GTAGTTCGAT GGGTGCTGAT TTAAAGTATT TTGGAGGAAG TGGCGGTAAA ATTCAAACAG GAACCGTTAT TGTTGATGGA AACATCGATA CAAGGTTTGG AATAAGCATG GTTTCTGGAA CCGTTTATTT AAATGAAAAT TTTAGCTTAA AAGAGCCTAT TGGAAACATC ATCGAAGTTG AAAGCGATAT TTCGGGGTAT AAAAAATACA TTTCAATTAC TGTATTAATG GAGTCCAAAC ATGACGAAAA AGTTTTAAAA CCAAACATTT TAAAGAATAA TGAGCTTATT TTAAATGACA AGGTAATTCG AGATACGATT GGTGCGAGAA TTGAAAATGG ATCAAAAATT ACAGTAAATG GAAATGTTGA CCTTAGTACT GGAATTTTGA TGAAAAATGG AACCGTTACA GTAAATGGAA ATGCTGGAAA AAATACCGGG TCTGTTTTAA AAGGCGGAAC TGTAATTATA AATGGGAATA CTAGAGATTT TACTGCATCT GACATGATAT CTGGAACAAT AATCATTAAT GGAAACGCAG GTAAATTTTT AGGATCAAAA AAGAAAAAAG GAGTAATTTA TGCAAAAGAT GGTTCAGCAA TTCCTCCTTT AAAAAAACAG TCATTAAATT CTAAAGATAA AGAGCTGCTT TCTAAAAATG GATTTTTTGG AGAATTTGTA AAATTTTAA
|
Protein sequence | MVFGIFKKKK KTVEDYLTDK NVLELILDDP KDCVLDFTYN FIWQSNFDIK SEVQKGISYE KLVNHIKNPE NVVYIKGDMG HRFCSSMGAD LKYFGGSGGK IQTGTVIVDG NIDTRFGISM VSGTVYLNEN FSLKEPIGNI IEVESDISGY KKYISITVLM ESKHDEKVLK PNILKNNELI LNDKVIRDTI GARIENGSKI TVNGNVDLST GILMKNGTVT VNGNAGKNTG SVLKGGTVII NGNTRDFTAS DMISGTIIIN GNAGKFLGSK KKKGVIYAKD GSAIPPLKKQ SLNSKDKELL SKNGFFGEFV KF
|
| |