| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0847 |
|---|
| Symbol | |
|---|
| ID | 5738176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 788663 |
|---|
| End bp | 789841 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641283322 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_001548896 |
|---|
| Protein GI | 159905234 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.461656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTA GCTGGGTGTT GTTTACCATT GGAATTGCGC TAATTTTTGG TAAACTTGGT
GACCACCTGA TGAATAAATT GGGATTTCCT GGCGTTCTCG GCGAAATGCT TATGGGAATG
CTGATTGGAA ATCTAGTATT TTTTGGATTA GTGAGTCCTG AGCATCTTAC AATTCACAAC
AACGAAGTTT TTGATTTTTT ATCTAGACTT GGTATTATAT TCTTATTATT TTTAGGTGGG
CTTGATACAG ATTTATCAGT TTTAAAAAGA ACCGGTAAAA TTGCGACAGT TTCCACAGTT
TTTGGTGTTT TAGTCCCCCT GTTTATGGGT TATCTTGCAC TGCAGTATAT GGGATACAGT
AGTGTTGAAT CGTTTGCAGG CGGTGTGGTT TTAACTGCAA CGAGTATTGG AATTACTGTA
AGGGTAATGA TGGATTTAGG GGTGCTAAAA AGTGAAGTTG GTGCAGCATC CCTTAGTGCA
AGCATTATGG ACGACTTTTT GGGAATCATG CTGATAATAT TTGCAGTGGG CACTGGAAGC
GTTCTTGGAC TTTTGGGAAA ATTCGCAATT TTCTTTATAA TTACGGGTTT TCTTGCCATG
AAATTTGTAC ATAAATTCAT CTCATTTTCT GAAAAACTCC ATGTAGAAAA AGGGATACTA
TCACTTGCAA TTGCAGTTAT GTTTTTATTC TCGTTTTTAG CAGAAAACTG GTTTGAAGCG
GCTATTGAAG GGTCATTCAT GGCAGGTTTA GTCCTTTCAA GAACTCCCGA AGGTAAAAAC
TTAATTGAAG ATGTAAAAAC AATAGGATAC AGTATTTTAA TTCCATTATT CTTTGTGTAT
ACTGGAGCGT CATTAAATTT AACAATATTT GGAGATTTTG ACGCACTTTA CCTTGCTTTA
GTACTAACTG CAATTGCAAT TGTGAGTAAA GTTGTTGGAA GGGGATTTGG TGCGAGAATT
ATGGGATGGA ATCTTAAAAA ATCGCTTCAG ATGGGAATTG GATCAATTCC AAGAGCTGAA
ATTGCGTTAA TCAACCTTAT GGTTGCAATA CATGCAGGAG TAATCTCGGA ATCCAATGTC
GGAAAATTCA TTGCTGCAAC GATGATATTT ATCACAATAT CGATTATTTC AACTCCGCCC
CTATTAAAAT GGGCTTTTGC AGAAGAAATA GAAAATTAA
|
|---|
| Protein sequence | MEISWVLFTI GIALIFGKLG DHLMNKLGFP GVLGEMLMGM LIGNLVFFGL VSPEHLTIHN
NEVFDFLSRL GIIFLLFLGG LDTDLSVLKR TGKIATVSTV FGVLVPLFMG YLALQYMGYS
SVESFAGGVV LTATSIGITV RVMMDLGVLK SEVGAASLSA SIMDDFLGIM LIIFAVGTGS
VLGLLGKFAI FFIITGFLAM KFVHKFISFS EKLHVEKGIL SLAIAVMFLF SFLAENWFEA
AIEGSFMAGL VLSRTPEGKN LIEDVKTIGY SILIPLFFVY TGASLNLTIF GDFDALYLAL
VLTAIAIVSK VVGRGFGARI MGWNLKKSLQ MGIGSIPRAE IALINLMVAI HAGVISESNV
GKFIAATMIF ITISIISTPP LLKWAFAEEI EN
|
|---|
| |